RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FHL2Q14192 279 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 WDR73Q6P4I2 378 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 ZNF575Q86XF7 245 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
SNCA-202ENST00000345009 A0A0J9YY99 117 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 GZMBP10144 247 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 CRYBA4P53673 196 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 PNRC1Q12796 327 aaPredicted RBP8.3□□□□□ -1.08
SNCA-202ENST00000345009 LGALS9CQ6DKI2 356 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 POM121L12Q8N7R1 296 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 OR10G8Q8NGN5 311 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 ISOC2Q96AB3 205 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 PRADC1Q9BSG0 188 aa8.3□□□□□ -1.08
SNCA-202ENST00000345009 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 NXPH4O95158 308 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 IGLC6P0CF74 106 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 CCL18P55774 89 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 SSTP61278 116 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
SNCA-202ENST00000345009 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 COMMD7Q86VX2 200 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 OR10AG1Q8NH19 301 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 GFRA4Q9GZZ7 299 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 STARD9Q9P2P6 4700 aa8.29□□□□□ -1.08
SNCA-202ENST00000345009 TRBV6-4A0A1B0GX49 114 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 TMEM218A2RU14 115 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 LY6G6CO95867 125 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
SNCA-202ENST00000345009 RHOHQ15669 191 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 FAM74A4Q5TZK3 123 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 SMIM15Q7Z3B0 74 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
SNCA-202ENST00000345009 A0A087WWL8 130 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 LCE6AA0A183 80 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 F8W036 122 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 MT-ND4LP03901 98 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 GYPEP15421 78 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 CTRLP40313 264 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 FOXA3P55318 350 aaPredicted RBP8.27□□□□□ -1.09
SNCA-202ENST00000345009 RNF212Q495C1 297 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
SNCA-202ENST00000345009 F5H697 171 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 CRYGDP07320 174 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 NTF3P20783 257 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 SRIP30626 198 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
SNCA-202ENST00000345009 RAB4BP61018 213 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 TWIST1Q15672 202 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 SLC25A29Q8N8R3 303 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 JPT2Q9H910 190 aa8.26□□□□□ -1.09
SNCA-202ENST00000345009 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
SNCA-202ENST00000345009 A0A1B0GUT8 65 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 HIGD1CA8MV81 97 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 NEGR1Q7Z3B1 354 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 C14orf178Q8N769 122 aaPredicted RBP8.25□□□□□ -1.09
SNCA-202ENST00000345009 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 SEC11CQ9BY50 192 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 SAMD10Q9BYL1 202 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 NAT8BQ9UHF3 227 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 V9GYV3 84 aa8.25□□□□□ -1.09
SNCA-202ENST00000345009 A0A096LPF7 62 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 TRBV10-1A0A0K0K1A3 114 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 H7C1H1 209 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 K7EQD1 137 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 RIGQ13278 110 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 ZNF56Q15929 161 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.24□□□□□ -1.09
SNCA-202ENST00000345009 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
SNCA-202ENST00000345009 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
SNCA-202ENST00000345009 MSRB1Q9NZV6 116 aa8.23□□□□□ -1.09
SNCA-202ENST00000345009 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
SNCA-202ENST00000345009 DYNC2H1Q8NCM8 4307 aaKnown RBP8.22□□□□□ -1.09
SNCA-202ENST00000345009 A0A1B0GW15 77 aa8.22□□□□□ -1.09
SNCA-202ENST00000345009 SMIM27A0A1W2PRY6 76 aa8.22□□□□□ -1.09
SNCA-202ENST00000345009 S100A8P05109 93 aa8.22□□□□□ -1.09
SNCA-202ENST00000345009 RPL36AP83881 106 aaKnown RBP8.22□□□□□ -1.09
SNCA-202ENST00000345009 NDUFA5Q16718 116 aa8.22□□□□□ -1.09
SNCA-202ENST00000345009 RPL36ALQ969Q0 106 aaKnown RBP8.22□□□□□ -1.09
SNCA-202ENST00000345009 MGPP08493 103 aa8.21□□□□□ -1.1
SNCA-202ENST00000345009 EVI2AP22794 236 aa8.21□□□□□ -1.1
SNCA-202ENST00000345009 Q6ZSN1 163 aa8.21□□□□□ -1.1
SNCA-202ENST00000345009 NUP35Q8NFH5 326 aa8.21□□□□□ -1.1
SNCA-202ENST00000345009 CTDSP1Q9GZU7 261 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms