RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 F6UB75 175 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 ZFAND2AQ8N6M9 145 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 PTPN13Q12923 2485 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
EGFR-203ENST00000344576 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 MAPK1IP1LQ8NDC0 245 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 PIMREGQ9BSJ6 248 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
EGFR-203ENST00000344576 TMEM238LA0A1B0GVL6 79 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 A6NJY4 79 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 RPL39P62891 51 aaKnown RBP12.12□□□□□ -0.47
EGFR-203ENST00000344576 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 A0A0J9YY99 117 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 GATA3P23771 443 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 ARL3P36405 182 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 USP9YO00507 2555 aaPredicted RBP12.12□□□□□ -0.47
EGFR-203ENST00000344576 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 JPT2Q9H910 190 aa12.12□□□□□ -0.47
EGFR-203ENST00000344576 C1orf122Q6ZSJ8 110 aa12.11□□□□□ -0.47
EGFR-203ENST00000344576 GPHB5Q86YW7 130 aa12.11□□□□□ -0.47
EGFR-203ENST00000344576 TP53TG1Q9Y2A0 90 aa12.11□□□□□ -0.47
EGFR-203ENST00000344576 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
EGFR-203ENST00000344576 RNASE4P34096 147 aaKnown RBP12.11□□□□□ -0.47
EGFR-203ENST00000344576 TMEM219Q86XT9 240 aa12.11□□□□□ -0.47
EGFR-203ENST00000344576 ASIPP42127 132 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 KRTAP10-9P60411 292 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 EEF1AKMT3Q96AZ1 226 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 MRPL53Q96EL3 112 aaKnown RBP12.1□□□□□ -0.47
EGFR-203ENST00000344576 ZNF469Q96JG9 3925 aaPredicted RBP12.1□□□□□ -0.47
EGFR-203ENST00000344576 CFC1BP0CG36 223 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 CFC1P0CG37 223 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 UBE2E1P51965 193 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 U3KQE9 123 aa12.1□□□□□ -0.47
EGFR-203ENST00000344576 TRBV12-3P01733 135 aa12.09□□□□□ -0.47
EGFR-203ENST00000344576 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
EGFR-203ENST00000344576 SORL1Q92673 2214 aa12.09□□□□□ -0.47
EGFR-203ENST00000344576 NPFFO15130 113 aa12.09□□□□□ -0.47
EGFR-203ENST00000344576 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
EGFR-203ENST00000344576 IGHV4-38-2P0DP08 117 aa12.08□□□□□ -0.47
EGFR-203ENST00000344576 ANKRD29Q8N6D5 301 aa12.08□□□□□ -0.47
EGFR-203ENST00000344576 PPDPFLQ8WWR9 84 aa12.08□□□□□ -0.47
EGFR-203ENST00000344576 MINOS1Q5TGZ0 78 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 RNF183Q96D59 192 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 MINOS1-NBL1R4GNA1 71 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 TRAV21A0A0B4J279 112 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
EGFR-203ENST00000344576 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
EGFR-203ENST00000344576 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
EGFR-203ENST00000344576 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.48
EGFR-203ENST00000344576 OOSP1A8MZH6 123 aa12.07□□□□□ -0.48
EGFR-203ENST00000344576 HIST2H2BCQ6DN03 193 aa12.07□□□□□ -0.48
EGFR-203ENST00000344576 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
EGFR-203ENST00000344576 EIF4EBP3O60516 100 aaPredicted RBP12.06□□□□□ -0.48
EGFR-203ENST00000344576 C9orf139Q6ZV77 190 aa12.06□□□□□ -0.48
EGFR-203ENST00000344576 A0A087WWL8 130 aa12.06□□□□□ -0.48
EGFR-203ENST00000344576 IGIPA6NJ69 53 aa12.06□□□□□ -0.48
EGFR-203ENST00000344576 RPL11P62913 178 aaKnown RBP12.06□□□□□ -0.48
EGFR-203ENST00000344576 OR10J6PQ8NGY7 276 aa12.06□□□□□ -0.48
EGFR-203ENST00000344576 H7C2G1 150 aa12.05□□□□□ -0.48
EGFR-203ENST00000344576 SCGB1C2P0DMR2 95 aa12.05□□□□□ -0.48
EGFR-203ENST00000344576 SRD5A1P18405 259 aa12.05□□□□□ -0.48
EGFR-203ENST00000344576 TRPT1Q86TN4 253 aaKnown RBP12.05□□□□□ -0.48
EGFR-203ENST00000344576 OPRPNQ99935 248 aaPredicted RBP12.05□□□□□ -0.48
EGFR-203ENST00000344576 CSPG4Q6UVK1 2322 aa12.05□□□□□ -0.48
EGFR-203ENST00000344576 A8MWV9 139 aa12.05□□□□□ -0.48
EGFR-203ENST00000344576 LINC00315P59091 139 aa12.05□□□□□ -0.48
EGFR-203ENST00000344576 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 TRBV7-1A0A0A6YYK4 115 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 AVPP01185 164 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 LINC00477Q96M19 166 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 AMELXQ99217 191 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 PMVKQ15126 192 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 KIF25-AS1Q9Y6Z4 181 aa12.04□□□□□ -0.48
EGFR-203ENST00000344576 DOPEY2Q9Y3R5 2298 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 ZNF688P0C7X2 276 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 HERVK_113P61574 105 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 LY6EQ16553 131 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 SUMO4Q6EEV6 95 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 NAV2Q8IVL1 2488 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 SOCS3O14543 225 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 LENEPQ9Y5L5 61 aa12.03□□□□□ -0.48
EGFR-203ENST00000344576 IGHV1-69DA0A0B4J2H0 117 aa12.02□□□□□ -0.48
EGFR-203ENST00000344576 IGHV1-69P01742 117 aa12.02□□□□□ -0.48
EGFR-203ENST00000344576 IGHV3-11P01762 117 aa12.02□□□□□ -0.48
EGFR-203ENST00000344576 KLK9Q2XQG4 91 aa12.02□□□□□ -0.48
EGFR-203ENST00000344576 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.48
EGFR-203ENST00000344576 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.48
EGFR-203ENST00000344576 APCP25054 2843 aa12.02□□□□□ -0.49
EGFR-203ENST00000344576 A4D1N5 150 aa12.02□□□□□ -0.49
EGFR-203ENST00000344576 C9JAW5 83 aa12.02□□□□□ -0.49
EGFR-203ENST00000344576 F5H697 171 aa12.02□□□□□ -0.49
EGFR-203ENST00000344576 MSMBP08118 114 aa12.02□□□□□ -0.49
EGFR-203ENST00000344576 PRO1854Q9UHT4 67 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms