RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 HOXD3P31249 432 aaPredicted RBP9.93□□□□□ -0.82
COL18A1-201ENST00000342220 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
COL18A1-201ENST00000342220 Q6ZQT7 251 aa9.93□□□□□ -0.82
COL18A1-201ENST00000342220 ZNF747Q9BV97 191 aa9.93□□□□□ -0.82
COL18A1-201ENST00000342220 CLPSL1A2RUU4 121 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 Q6ZSV7 163 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 Q6ZUT4 128 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 D6R8Y8 96 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 PSMG4Q5JS54 123 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 SH2D1AO60880 128 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 TMEM78Q5T7P6 136 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 DYNLRB2Q8TF09 96 aa9.92□□□□□ -0.82
COL18A1-201ENST00000342220 DAZ1Q9NQZ3 744 aaKnown RBP9.92□□□□□ -0.82
COL18A1-201ENST00000342220 PRSS29PA6NIE9 313 aa9.91□□□□□ -0.82
COL18A1-201ENST00000342220 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
COL18A1-201ENST00000342220 CACNG7P62955 275 aa9.91□□□□□ -0.82
COL18A1-201ENST00000342220 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
COL18A1-201ENST00000342220 TTTY13Q9BZ97 58 aa9.91□□□□□ -0.82
COL18A1-201ENST00000342220 A0A096LNJ9 63 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 CD28P10747 220 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 Q6AWC8 147 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 SIGLEC8Q9NYZ4 499 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 PSMB8P28062 276 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 FOXC2Q99958 501 aa9.9□□□□□ -0.82
COL18A1-201ENST00000342220 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.82
COL18A1-201ENST00000342220 IGHG4P01861 327 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 PDE6HQ13956 83 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 PRELID3AQ96N28 172 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 SMKR1H3BMG3 65 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 FOXI1Q12951 378 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 FAM104BQ5XKR9 115 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 TEX29Q8N6K0 151 aa9.89□□□□□ -0.83
COL18A1-201ENST00000342220 IGHV3OR16-12A0A075B7B8 117 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 NDUFA4O00483 81 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 ZNF80P51504 273 aaPredicted RBP9.88□□□□□ -0.83
COL18A1-201ENST00000342220 TRAV12-2A0A075B6T6 113 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 IGLL5B9A064 214 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 RNASE4P34096 147 aaKnown RBP9.88□□□□□ -0.83
COL18A1-201ENST00000342220 FHL3Q13643 280 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 MRPL51Q4U2R6 128 aaKnown RBP9.88□□□□□ -0.83
COL18A1-201ENST00000342220 PRR25Q96S07 402 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 CCDC179H3BU77 68 aa9.88□□□□□ -0.83
COL18A1-201ENST00000342220 IGLV1-40P01703 118 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 S100A4P26447 101 aaKnown RBP9.87□□□□□ -0.83
COL18A1-201ENST00000342220 ORMDL3Q8N138 153 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 OR10J6PQ8NGY7 276 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 TMEM190Q8WZ59 177 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 AGPAT4-IT1Q9H0P7 198 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 E9PLD3 99 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 FCER1GP30273 86 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 C20orf173Q96LM9 149 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 TENM1Q9UKZ4 2725 aa9.87□□□□□ -0.83
COL18A1-201ENST00000342220 TWIST1Q15672 202 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 U3KQK5 164 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 DLX4Q92988 240 aaPredicted RBP9.86□□□□□ -0.83
COL18A1-201ENST00000342220 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 NOTCH1P46531 2555 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 GAGE7O76087 117 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 NPYP01303 97 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 GAGE4Q13068 117 aa9.86□□□□□ -0.83
COL18A1-201ENST00000342220 CKS2P33552 79 aa9.85□□□□□ -0.83
COL18A1-201ENST00000342220 KRTAP1-1Q07627 177 aa9.85□□□□□ -0.83
COL18A1-201ENST00000342220 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
COL18A1-201ENST00000342220 MSRB1Q9NZV6 116 aa9.85□□□□□ -0.83
COL18A1-201ENST00000342220 LGALS1P09382 135 aaKnown RBP9.85□□□□□ -0.83
COL18A1-201ENST00000342220 KNCNA6PVL3 124 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 M0QXV9 152 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 VWFP04275 2813 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 ELANEP08246 267 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 ZNF575Q86XF7 245 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 APRG1Q8IVJ8 170 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 NFE4Q86UQ8 179 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 PTH2Q96A98 100 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 PRO0461Q9UI25 63 aa9.84□□□□□ -0.83
COL18A1-201ENST00000342220 TRAV12-3A0A0B4J271 114 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 M0R381 172 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 FSHBP01225 129 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 HBDP02042 147 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 DEFB131AP59861 70 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 SLC50A1Q9BRV3 221 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 GAS8-AS1O95177 125 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 NHLRC4P0CG21 123 aaPredicted RBP9.83□□□□□ -0.84
COL18A1-201ENST00000342220 COX8CQ7Z4L0 72 aa9.83□□□□□ -0.84
COL18A1-201ENST00000342220 PPDPFQ9H3Y8 114 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms