RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 C11orf86A6NJI1 115 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV1-8P0DP01 117 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 PRR25Q96S07 402 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV4-30-2A0A087WSY4 118 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 ZNF134P52741 427 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 SRSF3P84103 164 aaKnown RBP2.6□□□□□ -1.99
CSMD3-202ENST00000339701 HIST2H2BCQ6DN03 193 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 HIST2H2BDQ6DRA6 164 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 HCP5Q6MZN7 132 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 PSMB8P28062 276 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 EPG5Q9HCE0 2579 aa2.6□□□□□ -1.99
CSMD3-202ENST00000339701 SAA2P0DJI9 122 aaPredicted RBP2.59□□□□□ -1.99
CSMD3-202ENST00000339701 SRXN1Q9BYN0 137 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 Q6P435 159 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV3-21A0A0B4J1V1 117 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 DNAJC9-AS1A6NH13 148 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 DEFB112Q30KQ8 113 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 WFDC11Q8NEX6 87 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 C18orf15Q96N68 181 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 WDR87Q6ZQQ6 2873 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV1OR15-1A0A075B7D0 117 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 TRAV13-1A0A0B4J241 112 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 SCO2A0A1W2PP80 73 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 H3BPC8 53 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 RNASE4P34096 147 aaKnown RBP2.59□□□□□ -1.99
CSMD3-202ENST00000339701 FAM201AQ5SY85 155 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 AMTNQ6UX39 209 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 C17orf77Q96MU5 243 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 WWC2-AS2Q96NR7 200 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 A0A087WZ39 114 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 LOC105371267A0A1B0GV96 52 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 E9PLD3 99 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 PSG7Q13046 419 aa2.59□□□□□ -1.99
CSMD3-202ENST00000339701 IGKV1D-12P01611 117 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 LINC00574Q9H8X3 128 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 ICOSQ9Y6W8 199 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 TRBV10-2A0A0K0K1G8 114 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 SNAI2O43623 268 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 LTAP01374 205 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 ZNF503Q96F45 646 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 UBE2E2Q96LR5 201 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 TRAV8-3A0A0A6YYJ7 113 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 IBA57-AS1B1ANH7 110 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 RPS28P62857 69 aaKnown RBP2.59□□□□□ -2
CSMD3-202ENST00000339701 Q6ZUT4 128 aa2.59□□□□□ -2
CSMD3-202ENST00000339701 WIPF3A6NGB9 483 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 USP17L23D6RBM5 183 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 C3orf84H3BNL1 204 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 IGHV1-46P01743 117 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 HAMPP81172 84 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 TMSB15BA0A087X1C1 80 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 SH2D1AO60880 128 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 GRNP28799 593 aaKnown RBP2.58□□□□□ -2
CSMD3-202ENST00000339701 RUSC1-AS1Q66K80 236 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 FAM19A3Q7Z5A8 133 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 SMIM26A0A096LP01 95 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 NDUFA3O95167 84 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 PFN2P35080 140 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 FAM110AQ9BQ89 295 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 UPK3BQ9BT76 320 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 FAM30AQ9NZY2 134 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 PIEZO2Q9H5I5 2752 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 BUB1B-PAK6H3BSN5 160 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 SERP2Q8N6R1 65 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 BAALCQ8WXS3 180 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 C16orf74Q96GX8 76 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 Q9HAA7 133 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 IGKV2D-26A0A0A0MRZ7 120 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 HRKO00198 91 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 NRGNQ92686 78 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 C4orf51C9J302 202 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 NDUFA1O15239 70 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 CTRLP40313 264 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 FOXI1Q12951 378 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 KLK15Q9H2R5 256 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 UFSP1Q6NVU6 142 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 C1orf159Q96HA4 380 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 SERP1Q9Y6X1 66 aa2.58□□□□□ -2
CSMD3-202ENST00000339701 A0A0J9YX75 114 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 PMS2P5A8MQ11 134 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 H0YJW9 148 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 PYGO1Q9Y3Y4 419 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 DHRS4-AS1Q9P1J3 65 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 LGALS9O00182 355 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 ARMS2P0C7Q2 107 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 GATA1P15976 413 aaPredicted RBP2.57□□□□□ -2
CSMD3-202ENST00000339701 HOXB4P17483 251 aaPredicted RBP2.57□□□□□ -2
CSMD3-202ENST00000339701 C4orf3Q8WVX3 66 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 GTSF1Q8WW33 167 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 TRBV7-3A0A075B6L6 115 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGHV4-31P0DP07 118 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGF2BP2-AS1Q96M15 143 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 ZNF747Q9BV97 191 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 RNASE7Q9H1E1 156 aaKnown RBP2.57□□□□□ -2
CSMD3-202ENST00000339701 TRAV23DV6A0A075B6W5 121 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGHV3-23P01764 117 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGHV4-39P01824 125 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 PRR20EP86478 221 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 PRR20CP86479 221 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms