RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 LECT2O14960 151 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 LPAL2Q16609 132 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 SUMO4Q6EEV6 95 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 DIRC1Q969H9 104 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 IGLV4-3A0A075B6K6 122 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 GAS8-AS1O95177 125 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 IGHV3-9P01782 118 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 DEFB114Q30KQ6 69 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 Q8N2B8 174 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 DOCK4Q8N1I0 1966 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 IGHV3-64A0A075B6Q5 118 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 hDV103S1A0JD37 113 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 MSMPQ1L6U9 139 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 C10orf55Q5SWW7 151 aa3.04□□□□□ -1.92
NEDD4-201ENST00000338963 RPL39LQ96EH5 51 aaKnown RBP3.04□□□□□ -1.92
NEDD4-201ENST00000338963 NLRC5Q86WI3 1866 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 H0Y8X5 98 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 BUB1B-PAK6H3BSN5 160 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 ADAMTSL4-AS1Q5T5F5 129 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 Q9H8V8 135 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 MYO18AQ92614 2054 aaKnown RBP3.03□□□□□ -1.92
NEDD4-201ENST00000338963 SCN1AP35498 2009 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 PLXND1Q9Y4D7 1925 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 IGLV3-19P01714 112 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 ELOF1P60002 83 aaKnown RBP3.03□□□□□ -1.92
NEDD4-201ENST00000338963 RPL36AP83881 106 aaKnown RBP3.03□□□□□ -1.92
NEDD4-201ENST00000338963 RPL36ALQ969Q0 106 aaKnown RBP3.03□□□□□ -1.92
NEDD4-201ENST00000338963 IGHV3-21A0A0B4J1V1 117 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 TRBV7-4A0A0J9YYF1 115 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 CASC2Q6XLA1 102 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 GAFA1Q96PS6 74 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 PLXNA2O75051 1894 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 ANK1P16157 1881 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 CLEC19AQ6UXS0 136 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 Q9HAA7 133 aa3.03□□□□□ -1.92
NEDD4-201ENST00000338963 A0A087WZ39 114 aa3.03□□□□□ -1.93
NEDD4-201ENST00000338963 TRBV6-8A0A0A6YYG3 113 aa3.03□□□□□ -1.93
NEDD4-201ENST00000338963 LINC01547P58512 204 aaPredicted RBP3.03□□□□□ -1.93
NEDD4-201ENST00000338963 A0A087WWL8 130 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 A0A1B0GW54 56 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 K7EIM0 57 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 BPY2O14599 106 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 C6orf223Q8N319 242 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 KRTAP17-1Q9BYP8 105 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 TNRC6AQ8NDV7 1962 aaKnown RBP3.02□□□□□ -1.93
NEDD4-201ENST00000338963 C8orf87E5RJ46 101 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 CCL17Q92583 94 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 SND1-IT1Q9HBX3 110 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 CPAMD8Q8IZJ3 1885 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 IGLV5-39A0A0G2JS06 123 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 LINC01560Q8TB33 94 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 LEAP2Q969E1 77 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 TRAV22A0A0B4J277 110 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 IGHV3-48P01763 117 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 CCL4P13236 92 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 RPL39P62891 51 aaKnown RBP3.02□□□□□ -1.93
NEDD4-201ENST00000338963 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 GPHB5Q86YW7 130 aa3.02□□□□□ -1.93
NEDD4-201ENST00000338963 MIR7-3HGQ8N6C7 128 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 MIA3Q5JRA6 1907 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 RUSC1-AS1Q66K80 236 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 Q8N3U1 123 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 ZNRF1Q8ND25 227 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 SPTSSBQ8NFR3 76 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 BPESC1Q9GZL8 116 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 CITO14578 2027 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-201ENST00000338963 GNLYP22749 145 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 MUC7Q8TAX7 377 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 NCR3O14931 201 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 MP68P56378 58 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 C1orf229Q6ZS94 237 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-201ENST00000338963 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 C11orf21Q9P2W6 132 aa3.01□□□□□ -1.93
NEDD4-201ENST00000338963 IGHV1OR15-1A0A075B7D0 117 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 KIF25-AS1Q9Y6Z4 181 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 TICRRQ7Z2Z1 1910 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 IGLV11-55A0A075B6I3 123 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 NDPQ00604 133 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 H3BPC8 53 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 LHBP01229 141 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 SYCNQ0VAF6 134 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 ZNF575Q86XF7 245 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 RLFQ13129 1914 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 TRBV10-1A0A0K0K1A3 114 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 DEFB133Q30KQ1 61 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 C9orf106Q8NAJ2 232 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 SCN8AQ9UQD0 1980 aa3□□□□□ -1.93
NEDD4-201ENST00000338963 IGKV3-15P01624 115 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 Q6ZTC4 211 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 HCG22E2RYF7 251 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 PRM2P04554 102 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 CTSGP08311 255 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 ZNF625Q96I27 306 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-201ENST00000338963 DENND4CQ5VZ89 1909 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 IGHV3-64DA0A0J9YX35 117 aa2.99□□□□□ -1.93
NEDD4-201ENST00000338963 M0QY20 66 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms