RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 IGLL1P15814 213 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 Q6ZVH6 145 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 ZNF747Q9BV97 191 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 A0A096LPF7 62 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 VSIRQ9H7M9 311 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 TRBV6-1A0A0K0K1D8 114 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 XCL1P47992 114 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 SAMD5Q5TGI4 173 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 AMTNQ6UX39 209 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 LINC00574Q9H8X3 128 aa5.66□□□□□ -1.5
EPHA3-201ENST00000336596 POLR3KQ9Y2Y1 108 aaPredicted RBP5.66□□□□□ -1.5
EPHA3-201ENST00000336596 ARFGEF3Q5TH69 2177 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 A0A0U1RRA0 63 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 IFITM1P13164 125 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 PFN2P35080 140 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 TRAV8-2A0A0B4J237 113 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 CRYGDP07320 174 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 HIST2H2BCQ6DN03 193 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 FXYD5Q96DB9 178 aa5.65□□□□□ -1.5
EPHA3-201ENST00000336596 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.65□□□□□ -1.51
EPHA3-201ENST00000336596 UBL5Q9BZL1 73 aa5.65□□□□□ -1.51
EPHA3-201ENST00000336596 MYO18BQ8IUG5 2567 aa5.65□□□□□ -1.51
EPHA3-201ENST00000336596 CHD3Q12873 2000 aaKnown RBP5.65□□□□□ -1.51
EPHA3-201ENST00000336596 CTSGP08311 255 aa5.65□□□□□ -1.51
EPHA3-201ENST00000336596 DMRT1Q9Y5R6 373 aa5.65□□□□□ -1.51
EPHA3-201ENST00000336596 U3KQK5 164 aa5.65□□□□□ -1.51
EPHA3-201ENST00000336596 K7EIM0 57 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 C2orf82Q6UX34 121 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 C11orf52Q96A22 123 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 IGHV3-38A0A0C4DH36 116 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 IGLV2-23P01705 113 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 EBI3Q14213 229 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 MRPL52Q86TS9 123 aaKnown RBP5.64□□□□□ -1.51
EPHA3-201ENST00000336596 DEFB125Q8N687 156 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 AGPAT4-IT1Q9H0P7 198 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 A0A0J9YX75 114 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 DEFB114Q30KQ6 69 aa5.64□□□□□ -1.51
EPHA3-201ENST00000336596 SUMO4Q6EEV6 95 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 Q8N976 141 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 COX7B2Q8TF08 81 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 CYTL1Q9NRR1 136 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 CHD7Q9P2D1 2997 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 CDSNQ15517 529 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 GTSF1LQ9H1H1 148 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 TRBV20-1A0A075B6N2 111 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 PRR20EP86478 221 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 PRR20CP86479 221 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 PRR20DP86480 221 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 PRR20BP86481 221 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 PRR20AP86496 221 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 F6UB75 175 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 H0YGX0 51 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 MRPL51Q4U2R6 128 aaKnown RBP5.63□□□□□ -1.51
EPHA3-201ENST00000336596 ATOH7Q8N100 152 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 DYNAPQ8N1N2 210 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 SMIM27A0A1W2PRY6 76 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 TEX22C9J3V5 150 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 LY6G6CO95867 125 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 FAM19A2Q8N3H0 131 aa5.63□□□□□ -1.51
EPHA3-201ENST00000336596 SIVA1O15304 175 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 DDTP30046 118 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 ZNF580Q9UK33 172 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 PRB4P10163 310 aaPredicted RBP5.62□□□□□ -1.51
EPHA3-201ENST00000336596 HLA-DMBP28068 263 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 UFSP1Q6NVU6 142 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 ZNF702PQ9H963 129 aa5.62□□□□□ -1.51
EPHA3-201ENST00000336596 TMEM61Q8N0U2 210 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 NPC2P61916 151 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 SYS1-DBNDD2H3BUS1 97 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 NDUFS5O43920 106 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 LINC01006Q8NI28 216 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 CYYR1Q96J86 154 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 ORMDL1Q9P0S3 153 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 SONP18583 2426 aaKnown RBP5.61□□□□□ -1.51
EPHA3-201ENST00000336596 VSIG2Q96IQ7 327 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 TNRC6BQ9UPQ9 1833 aaKnown RBP5.61□□□□□ -1.51
EPHA3-201ENST00000336596 HIVEP3Q5T1R4 2406 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 LGALS9CQ6DKI2 356 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 CLPSL2Q6UWE3 100 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 KIAA1549Q9HCM3 1950 aa5.61□□□□□ -1.51
EPHA3-201ENST00000336596 A8MWP6 167 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 MUC7Q8TAX7 377 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 TMEM213A2RRL7 107 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 F8VRH5 84 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 F8WDY8 70 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 MIAQ16674 131 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 C9orf153Q5TBE3 101 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
EPHA3-201ENST00000336596 A4D1N5 150 aa5.59□□□□□ -1.51
EPHA3-201ENST00000336596 PDE6GP18545 87 aa5.59□□□□□ -1.51
EPHA3-201ENST00000336596 RANBP2P49792 3224 aaKnown RBP5.59□□□□□ -1.51
EPHA3-201ENST00000336596 DIRC1Q969H9 104 aa5.59□□□□□ -1.51
EPHA3-201ENST00000336596 RITA1Q96K30 269 aa5.59□□□□□ -1.51
EPHA3-201ENST00000336596 NAV3Q8IVL0 2385 aa5.59□□□□□ -1.51
EPHA3-201ENST00000336596 GNRH2O43555 120 aa5.59□□□□□ -1.51
EPHA3-201ENST00000336596 CARD19Q96LW7 228 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms