RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 TIRAPP58753 221 aa10.1□□□□□ -0.79
KATNA1-201ENST00000335643 SYT8Q8NBV8 401 aa10.1□□□□□ -0.79
KATNA1-201ENST00000335643 PCLOQ9Y6V0 5065 aa10.1□□□□□ -0.79
KATNA1-201ENST00000335643 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 GAGE1Q13065 139 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 GAGE4Q13068 117 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 GAGE5Q13069 117 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 SNAI2O43623 268 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 PDE6DO43924 150 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 CXCL1P09341 107 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 GZMBP10144 247 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 ATP6V0E2Q8NHE4 81 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
KATNA1-201ENST00000335643 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 VAX2Q9UIW0 290 aa10.09□□□□□ -0.79
KATNA1-201ENST00000335643 C19orf71A6NCJ1 209 aa10.08□□□□□ -0.8
KATNA1-201ENST00000335643 IFNA1P01562 189 aa10.08□□□□□ -0.8
KATNA1-201ENST00000335643 BTF3P20290 206 aaKnown RBP10.08□□□□□ -0.8
KATNA1-201ENST00000335643 Q8N3U1 123 aa10.08□□□□□ -0.8
KATNA1-201ENST00000335643 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
KATNA1-201ENST00000335643 IGHV3-38A0A0C4DH36 116 aa10.07□□□□□ -0.8
KATNA1-201ENST00000335643 RHODO00212 210 aa10.07□□□□□ -0.8
KATNA1-201ENST00000335643 GNG4P50150 75 aa10.07□□□□□ -0.8
KATNA1-201ENST00000335643 KRTAP10-2P60368 255 aa10.07□□□□□ -0.8
KATNA1-201ENST00000335643 SSTP61278 116 aa10.07□□□□□ -0.8
KATNA1-201ENST00000335643 OR5AL1P0C617 328 aa10.06□□□□□ -0.8
KATNA1-201ENST00000335643 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
KATNA1-201ENST00000335643 LELP1Q5T871 98 aa10.06□□□□□ -0.8
KATNA1-201ENST00000335643 SPATA12Q7Z6I5 190 aa10.06□□□□□ -0.8
KATNA1-201ENST00000335643 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
KATNA1-201ENST00000335643 ABCA13Q86UQ4 5058 aa10.06□□□□□ -0.8
KATNA1-201ENST00000335643 EVI2AP22794 236 aa10.05□□□□□ -0.8
KATNA1-201ENST00000335643 LINC01556Q5JQF7 62 aa10.05□□□□□ -0.8
KATNA1-201ENST00000335643 MSRB1Q9NZV6 116 aa10.05□□□□□ -0.8
KATNA1-201ENST00000335643 RBFOX3A6NFN3 312 aa10.05□□□□□ -0.8
KATNA1-201ENST00000335643 IGLC6P0CF74 106 aa10.05□□□□□ -0.8
KATNA1-201ENST00000335643 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.8
KATNA1-201ENST00000335643 SMIM12Q96EX1 92 aa10.05□□□□□ -0.8
KATNA1-201ENST00000335643 TRAV9-2A0A087WT02 112 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 C16orf90A8MZG2 172 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 K7EN84 100 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 OR2D3Q8NGH3 330 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
KATNA1-201ENST00000335643 TRAV8-6A0A0B4J262 113 aa10.03□□□□□ -0.8
KATNA1-201ENST00000335643 BLOC1S1P78537 153 aa10.03□□□□□ -0.8
KATNA1-201ENST00000335643 K7EP13 123 aa10.02□□□□□ -0.81
KATNA1-201ENST00000335643 ZNF56Q15929 161 aa10.02□□□□□ -0.81
KATNA1-201ENST00000335643 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
KATNA1-201ENST00000335643 DAZAP1Q96EP5 407 aaKnown RBP10.02□□□□□ -0.81
KATNA1-201ENST00000335643 TPPP3Q9BW30 176 aa10.02□□□□□ -0.81
KATNA1-201ENST00000335643 KRTAP17-1Q9BYP8 105 aa10.02□□□□□ -0.81
KATNA1-201ENST00000335643 P01737 135 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 TAGLN2P37802 199 aaKnown RBP10.01□□□□□ -0.81
KATNA1-201ENST00000335643 FER1L6-AS1Q8NA97 138 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 NUDT10Q8NFP7 164 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 NUDT11Q96G61 164 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
KATNA1-201ENST00000335643 IBA57-AS1B1ANH7 110 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 RAB4BP61018 213 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 UBE2D3P61077 147 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 UBE2D2P62837 147 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 TOR2AQ5JU69 321 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 NFE4Q86UQ8 179 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 C10orf126Q8N4M7 172 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
KATNA1-201ENST00000335643 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
KATNA1-201ENST00000335643 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
KATNA1-201ENST00000335643 A0A087WTM6 91 aa9.99□□□□□ -0.81
KATNA1-201ENST00000335643 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
KATNA1-201ENST00000335643 RPS20P60866 119 aaKnown RBP9.99□□□□□ -0.81
KATNA1-201ENST00000335643 LYZL1Q6UWQ5 148 aa9.99□□□□□ -0.81
KATNA1-201ENST00000335643 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
KATNA1-201ENST00000335643 OR10G8Q8NGN5 311 aa9.99□□□□□ -0.81
KATNA1-201ENST00000335643 Q9HAA7 133 aa9.99□□□□□ -0.81
KATNA1-201ENST00000335643 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
KATNA1-201ENST00000335643 ERVFC1-1P60608 527 aa9.98□□□□□ -0.81
KATNA1-201ENST00000335643 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
KATNA1-201ENST00000335643 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
KATNA1-201ENST00000335643 AP1S3Q96PC3 154 aa9.98□□□□□ -0.81
KATNA1-201ENST00000335643 F5H697 171 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 CEBPGP53567 150 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 FAM210AQ96ND0 272 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 RPP21Q9H633 154 aaKnown RBP9.97□□□□□ -0.81
KATNA1-201ENST00000335643 A0A087WWC5 75 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 NIT1Q86X76 327 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 EIF5A2Q9GZV4 153 aaKnown RBP9.97□□□□□ -0.81
KATNA1-201ENST00000335643 BIN3Q9NQY0 253 aa9.97□□□□□ -0.81
KATNA1-201ENST00000335643 LRCOL1A6NCL2 159 aa9.96□□□□□ -0.82
KATNA1-201ENST00000335643 NTF3P20783 257 aa9.96□□□□□ -0.82
KATNA1-201ENST00000335643 CTRLP40313 264 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms