RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TEX22C9J3V5 150 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 CD28P10747 220 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 C12orf74Q32Q52 190 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 SPATA12Q7Z6I5 190 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 CRLF1O75462 422 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 DEFB136Q30KP8 78 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 OVOL1O14753 267 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 Q6ZSV7 163 aa9.09□□□□□ -0.95
HDAC6-201ENST00000334136 IGLV11-55A0A075B6I3 123 aa9.09□□□□□ -0.96
HDAC6-201ENST00000334136 LGALS1P09382 135 aaKnown RBP9.09□□□□□ -0.96
HDAC6-201ENST00000334136 TRAV8-4A0A0B4J246 113 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 HLA-DRB4P13762 266 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 HLA-DRB4X5D2U9 266 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 CCL24O00175 119 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 SPXQ9BT56 116 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 MYMXA0A1B0GTQ4 84 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 F8VRH5 84 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 CRYGCP07315 174 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 ATP6V0BQ99437 205 aa9.08□□□□□ -0.96
HDAC6-201ENST00000334136 NDUFA4O00483 81 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 UBE2E2Q96LR5 201 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 ZZEF1O43149 2961 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 K7EIM0 57 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 UBE2L6O14933 153 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 ANXA2RQ3ZCQ2 193 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
HDAC6-201ENST00000334136 SIVA1O15304 175 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 Q8N6K4 173 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 ZNF48Q96MX3 618 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-201ENST00000334136 VCYO14598 125 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 IGF1P05019 195 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 HOXD3P31249 432 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-201ENST00000334136 C2orf82Q6UX34 121 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 C9orf139Q6ZV77 190 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 CITED2Q99967 270 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-201ENST00000334136 ITPR1Q14643 2758 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 TMEM89A2RUT3 159 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 CRYGBP07316 175 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 TCTEX1D4Q5JR98 221 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 SMIM2Q9BVW6 85 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
HDAC6-201ENST00000334136 A0A1B0GXF2 115 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 I3L2K1 104 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 M0R2P5 195 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 COL12A1Q99715 3063 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 IGKV1D-37A0A075B6S9 117 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 C1orf159Q96HA4 380 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 LINC00477Q96M19 166 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 INS-IGF2F8WCM5 200 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 IGHG4P01861 327 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-201ENST00000334136 FANCD2OSQ96PS1 177 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
HDAC6-201ENST00000334136 TEP1Q99973 2627 aaKnown RBP9.04□□□□□ -0.96
HDAC6-201ENST00000334136 C19orf71A6NCJ1 209 aa9.04□□□□□ -0.96
HDAC6-201ENST00000334136 IGLL5B9A064 214 aa9.04□□□□□ -0.96
HDAC6-201ENST00000334136 TRAV8-3A0A0A6YYJ7 113 aa9.04□□□□□ -0.96
HDAC6-201ENST00000334136 LINC01587Q99440 93 aa9.04□□□□□ -0.96
HDAC6-201ENST00000334136 SLURP1P55000 103 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 STHQ8IWL8 128 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 LINC01006Q8NI28 216 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 A0A087WX48 190 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 CMC4P56277 68 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-201ENST00000334136 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 TMEM190Q8WZ59 177 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 PRSS29PA6NIE9 313 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 Q6ZS46 218 aa9.03□□□□□ -0.96
HDAC6-201ENST00000334136 KNCNA6PVL3 124 aa9.02□□□□□ -0.96
HDAC6-201ENST00000334136 F6UB75 175 aa9.02□□□□□ -0.96
HDAC6-201ENST00000334136 CTSGP08311 255 aa9.02□□□□□ -0.96
HDAC6-201ENST00000334136 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.96
HDAC6-201ENST00000334136 ZNF702PQ9H963 129 aa9.02□□□□□ -0.96
HDAC6-201ENST00000334136 SDHAF1A6NFY7 115 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 FGF6P10767 208 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-201ENST00000334136 G3V4G9 280 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 A0A087WW49 117 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 MLST8Q9BVC4 326 aa9.02□□□□□ -0.97
HDAC6-201ENST00000334136 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
HDAC6-201ENST00000334136 DUSP14O95147 198 aaKnown RBP9.01□□□□□ -0.97
HDAC6-201ENST00000334136 PRAC2D3DTV9 90 aa9.01□□□□□ -0.97
HDAC6-201ENST00000334136 C10orf99Q6UWK7 81 aa9.01□□□□□ -0.97
HDAC6-201ENST00000334136 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-201ENST00000334136 TRBV20-1A0A075B6N2 111 aa9.01□□□□□ -0.97
HDAC6-201ENST00000334136 ATXN8Q156A1 80 aa9.01□□□□□ -0.97
HDAC6-201ENST00000334136 PRO1854Q9UHT4 67 aa9.01□□□□□ -0.97
HDAC6-201ENST00000334136 IGHV7-4-1A0A0J9YVY3 117 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 PMVKQ15126 192 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 PIFOQ8TCI5 191 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
HDAC6-201ENST00000334136 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
HDAC6-201ENST00000334136 MYCNOSP40205 109 aa9□□□□□ -0.97
HDAC6-201ENST00000334136 DEFB121Q5J5C9 76 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms