RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 A4D1N5 150 aa10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 PRSS2P07478 247 aa10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
CHRNA3-201ENST00000326828 HTN1P15515 57 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 LY6EQ16553 131 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 TEX29Q8N6K0 151 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 LINC00477Q96M19 166 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 SLC25A20O43772 301 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 UBE2D3P61077 147 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 UBE2D2P62837 147 aa10.78□□□□□ -0.68
CHRNA3-201ENST00000326828 TRAV12-3A0A0B4J271 114 aa10.77□□□□□ -0.68
CHRNA3-201ENST00000326828 EDN2P20800 178 aa10.77□□□□□ -0.68
CHRNA3-201ENST00000326828 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.68
CHRNA3-201ENST00000326828 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 SDHAF1A6NFY7 115 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 J3QQQ9 107 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 RNASE3P12724 160 aaKnown RBP10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 PMVKQ15126 192 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 LYRM7Q5U5X0 104 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 BRD3OSQ6XYD6 125 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 GPHB5Q86YW7 130 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 NTN5Q8WTR8 489 aaPredicted RBP10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 ELANEP08246 267 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
CHRNA3-201ENST00000326828 TCF15Q12870 199 aa10.76□□□□□ -0.69
CHRNA3-201ENST00000326828 ZNF56Q15929 161 aa10.76□□□□□ -0.69
CHRNA3-201ENST00000326828 RNASE13Q5GAN3 156 aaKnown RBP10.76□□□□□ -0.69
CHRNA3-201ENST00000326828 TRAV12-2A0A075B6T6 113 aa10.76□□□□□ -0.69
CHRNA3-201ENST00000326828 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
CHRNA3-201ENST00000326828 ATP6V0E2Q8NHE4 81 aa10.75□□□□□ -0.69
CHRNA3-201ENST00000326828 FAM159AQ6UWV7 190 aa10.75□□□□□ -0.69
CHRNA3-201ENST00000326828 C9orf139Q6ZV77 190 aa10.75□□□□□ -0.69
CHRNA3-201ENST00000326828 HIVEP3Q5T1R4 2406 aa10.75□□□□□ -0.69
CHRNA3-201ENST00000326828 CRLF1O75462 422 aa10.75□□□□□ -0.69
CHRNA3-201ENST00000326828 CSMD2Q7Z408 3487 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 MUSTN1Q8IVN3 82 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 AJUBAQ96IF1 538 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 IGHV3-73A0A0B4J1V6 119 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
CHRNA3-201ENST00000326828 TRAV41A0A0B4J266 112 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 TEX49A0A1B0GTD5 131 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 PF4V1P10720 104 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 LINC01619G3V211 115 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 SNCGO76070 127 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 MINOS1Q5TGZ0 78 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 SLC25A29Q8N8R3 303 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 SPXQ9BT56 116 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 MINOS1-NBL1R4GNA1 71 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 Q6ZSV7 163 aa10.73□□□□□ -0.69
CHRNA3-201ENST00000326828 EBI3Q14213 229 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 CELSR2Q9HCU4 2923 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 A0A0J9YXV3 536 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 GAGE2BQ13066 116 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 GAGE2EQ4V326 116 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 C3orf56Q8N813 242 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 GAGE2DQ9UEU5 116 aa10.72□□□□□ -0.69
CHRNA3-201ENST00000326828 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.69
CHRNA3-201ENST00000326828 KLK9Q9UKQ9 250 aa10.71□□□□□ -0.69
CHRNA3-201ENST00000326828 VCYO14598 125 aa10.71□□□□□ -0.69
CHRNA3-201ENST00000326828 EIF4EBP3O60516 100 aaPredicted RBP10.71□□□□□ -0.69
CHRNA3-201ENST00000326828 CEMP1Q6PRD7 247 aaPredicted RBP10.71□□□□□ -0.7
CHRNA3-201ENST00000326828 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.7
CHRNA3-201ENST00000326828 RHPN1-AS1Q9BWJ2 59 aa10.71□□□□□ -0.7
CHRNA3-201ENST00000326828 SIRPDQ9H106 197 aa10.71□□□□□ -0.7
CHRNA3-201ENST00000326828 FOXC1Q12948 553 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 IGF2-ASQ6U949 168 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 BPESC1Q9GZL8 116 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 MDFICQ9P1T7 246 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 A8MZ25 164 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 OVOL1O14753 267 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 CENPEQ02224 2701 aa10.7□□□□□ -0.7
CHRNA3-201ENST00000326828 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 A0A1W2PPR1 153 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 OOSP1A8MZH6 123 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 Q8N1Y9 231 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 C5orf56Q8N8D9 126 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 U3KQE9 123 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 USP9YO00507 2555 aaPredicted RBP10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 UBE2E1P51965 193 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 PAPPA-AS1Q5QFB9 102 aa10.69□□□□□ -0.7
CHRNA3-201ENST00000326828 CCDC179H3BU77 68 aa10.68□□□□□ -0.7
CHRNA3-201ENST00000326828 NPFFO15130 113 aa10.68□□□□□ -0.7
CHRNA3-201ENST00000326828 LINC00315P59091 139 aa10.68□□□□□ -0.7
CHRNA3-201ENST00000326828 PRRC2AP48634 2157 aaKnown RBP10.68□□□□□ -0.7
CHRNA3-201ENST00000326828 A0A0U1RRA0 63 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 GAGE5Q13069 117 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 GAGE6Q13070 117 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms