RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 LGALS1P09382 135 aaKnown RBP14.88□□□□□ -0.03
SOX2-201ENST00000325404 DEFB113Q30KQ7 82 aa14.88□□□□□ -0.03
SOX2-201ENST00000325404 TMEM141Q96I45 108 aa14.88□□□□□ -0.03
SOX2-201ENST00000325404 VCYO14598 125 aa14.87□□□□□ -0.03
SOX2-201ENST00000325404 AVPP01185 164 aa14.87□□□□□ -0.03
SOX2-201ENST00000325404 RRN3P1Q2M238 152 aa14.87□□□□□ -0.03
SOX2-201ENST00000325404 PRADC1Q9BSG0 188 aa14.87□□□□□ -0.03
SOX2-201ENST00000325404 TRBV6-5A0A0K0K1A5 114 aa14.86□□□□□ -0.03
SOX2-201ENST00000325404 LRRC75A-AS1Q8N1F1 130 aa14.86□□□□□ -0.03
SOX2-201ENST00000325404 IGIPA6NJ69 53 aa14.86□□□□□ -0.03
SOX2-201ENST00000325404 Q6ZS46 218 aa14.86□□□□□ -0.03
SOX2-201ENST00000325404 TIMM17AQ99595 171 aa14.86□□□□□ -0.03
SOX2-201ENST00000325404 RIPPLY3P57055 190 aa14.85□□□□□ -0.03
SOX2-201ENST00000325404 LGALS9O00182 355 aa14.85□□□□□ -0.03
SOX2-201ENST00000325404 CRYGDP07320 174 aa14.85□□□□□ -0.03
SOX2-201ENST00000325404 ZFP2Q6ZN57 461 aa14.85□□□□□ -0.03
SOX2-201ENST00000325404 J3QLI3 93 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 SUMO4Q6EEV6 95 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 MAPK1IP1LQ8NDC0 245 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 KMT2BQ9UMN6 2715 aaPredicted RBP14.84□□□□□ -0.03
SOX2-201ENST00000325404 A6NJY4 79 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 TGFAP01135 160 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 PSMB8P28062 276 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 PMVKQ15126 192 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 LCNL1Q6ZST4 164 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 C9orf85Q96MD7 179 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 KIR2DL4Q99706 377 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 SELENOKQ9Y6D0 94 aa14.84□□□□□ -0.03
SOX2-201ENST00000325404 IGKV3-7A0A075B6H7 116 aa14.83□□□□□ -0.04
SOX2-201ENST00000325404 TRBV27A0A0K0K1C4 114 aa14.83□□□□□ -0.04
SOX2-201ENST00000325404 DUSP14O95147 198 aaKnown RBP14.83□□□□□ -0.04
SOX2-201ENST00000325404 TSHBP01222 138 aa14.83□□□□□ -0.04
SOX2-201ENST00000325404 Q5PR19 223 aa14.83□□□□□ -0.04
SOX2-201ENST00000325404 HERVK_113P61574 105 aa14.83□□□□□ -0.04
SOX2-201ENST00000325404 HOXA3O43365 443 aaPredicted RBP14.82□□□□□ -0.04
SOX2-201ENST00000325404 PLA2G2AP14555 144 aa14.82□□□□□ -0.04
SOX2-201ENST00000325404 TP53TG1Q9Y2A0 90 aa14.82□□□□□ -0.04
SOX2-201ENST00000325404 IGLV4-69A0A075B6H9 119 aa14.82□□□□□ -0.04
SOX2-201ENST00000325404 ZNF815PA8K554 130 aa14.82□□□□□ -0.04
SOX2-201ENST00000325404 J3QKU1 62 aa14.82□□□□□ -0.04
SOX2-201ENST00000325404 CSPG4Q6UVK1 2322 aa14.81□□□□□ -0.04
SOX2-201ENST00000325404 CSMD2Q7Z408 3487 aa14.81□□□□□ -0.04
SOX2-201ENST00000325404 CD7P09564 240 aa14.81□□□□□ -0.04
SOX2-201ENST00000325404 SCGB2A2Q13296 93 aa14.81□□□□□ -0.04
SOX2-201ENST00000325404 MUC4Q99102 2169 aa14.81□□□□□ -0.04
SOX2-201ENST00000325404 IGHV3-16A0A0C4DH30 117 aa14.8□□□□□ -0.04
SOX2-201ENST00000325404 TEX48A0A1B0GUV7 120 aa14.8□□□□□ -0.04
SOX2-201ENST00000325404 RPL24P83731 157 aaKnown RBP14.8□□□□□ -0.04
SOX2-201ENST00000325404 RNF152Q8N8N0 203 aa14.8□□□□□ -0.04
SOX2-201ENST00000325404 SYT8Q8NBV8 401 aa14.8□□□□□ -0.04
SOX2-201ENST00000325404 DOPEY2Q9Y3R5 2298 aa14.8□□□□□ -0.04
SOX2-201ENST00000325404 SRD5A1P18405 259 aa14.8□□□□□ -0.04
SOX2-201ENST00000325404 TRAV12-3A0A0B4J271 114 aa14.79□□□□□ -0.04
SOX2-201ENST00000325404 A0A0J9YX75 114 aa14.79□□□□□ -0.04
SOX2-201ENST00000325404 C11orf86A6NJI1 115 aa14.79□□□□□ -0.04
SOX2-201ENST00000325404 SNRPD3P62318 126 aaKnown RBP14.79□□□□□ -0.04
SOX2-201ENST00000325404 SPANXB1Q9NS25 103 aaPredicted RBP14.79□□□□□ -0.04
SOX2-201ENST00000325404 SDHAF1A6NFY7 115 aa14.79□□□□□ -0.04
SOX2-201ENST00000325404 IGHV4-31P0DP07 118 aa14.79□□□□□ -0.04
SOX2-201ENST00000325404 UBE2D1P51668 147 aa14.79□□□□□ -0.04
SOX2-201ENST00000325404 MORN3Q6PF18 240 aaPredicted RBP14.79□□□□□ -0.04
SOX2-201ENST00000325404 AGRNO00468 2067 aa14.78□□□□□ -0.04
SOX2-201ENST00000325404 CREBBPQ92793 2442 aa14.78□□□□□ -0.04
SOX2-201ENST00000325404 CELSR1Q9NYQ6 3014 aa14.78□□□□□ -0.04
SOX2-201ENST00000325404 TMEM238C9JI98 176 aa14.78□□□□□ -0.04
SOX2-201ENST00000325404 J3QR89 54 aa14.78□□□□□ -0.04
SOX2-201ENST00000325404 RHOHQ15669 191 aa14.77□□□□□ -0.04
SOX2-201ENST00000325404 SCGB1D4Q6XE38 83 aa14.77□□□□□ -0.04
SOX2-201ENST00000325404 JPT2Q9H910 190 aa14.77□□□□□ -0.04
SOX2-201ENST00000325404 K7EQG2 157 aa14.77□□□□□ -0.05
SOX2-201ENST00000325404 ZNF876PQ49A33 203 aa14.77□□□□□ -0.05
SOX2-201ENST00000325404 F5H697 171 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 EDN2P20800 178 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 GAGE13Q4V321 117 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 Q96MF0 132 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 PRO0461Q9UI25 63 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 TENM4Q6N022 2769 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 WFDC2Q14508 124 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 NSUN5P1Q3KNT7 163 aa14.76□□□□□ -0.05
SOX2-201ENST00000325404 A0A087WWL8 130 aa14.75□□□□□ -0.05
SOX2-201ENST00000325404 H3BMG7 143 aa14.75□□□□□ -0.05
SOX2-201ENST00000325404 DEFB112Q30KQ8 113 aa14.75□□□□□ -0.05
SOX2-201ENST00000325404 M0QY20 66 aa14.75□□□□□ -0.05
SOX2-201ENST00000325404 CD300EQ496F6 205 aaPredicted RBP14.75□□□□□ -0.05
SOX2-201ENST00000325404 PLEKHB2Q96CS7 222 aa14.75□□□□□ -0.05
SOX2-201ENST00000325404 IGHV1OR15-1A0A075B7D0 117 aa14.74□□□□□ -0.05
SOX2-201ENST00000325404 SRSF9Q13242 221 aaKnown RBP eCLIP14.74□□□□□ -0.05
SOX2-201ENST00000325404 APCP25054 2843 aa14.74□□□□□ -0.05
SOX2-201ENST00000325404 A0A0J9YY99 117 aa14.74□□□□□ -0.05
SOX2-201ENST00000325404 TRPT1Q86TN4 253 aaKnown RBP14.74□□□□□ -0.05
SOX2-201ENST00000325404 NFE4Q86UQ8 179 aa14.74□□□□□ -0.05
SOX2-201ENST00000325404 ZNF688P0C7X2 276 aa14.73□□□□□ -0.05
SOX2-201ENST00000325404 ZNF256Q9Y2P7 627 aaPredicted RBP14.73□□□□□ -0.05
SOX2-201ENST00000325404 RPL39P62891 51 aaKnown RBP14.73□□□□□ -0.05
SOX2-201ENST00000325404 PGPEP1Q9NXJ5 209 aa14.73□□□□□ -0.05
SOX2-201ENST00000325404 KRTAP1-3Q8IUG1 177 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 CR1P17927 2039 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 IGHV4-59P01825 116 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 TMEM95Q3KNT9 176 aa14.72□□□□□ -0.05
SOX2-201ENST00000325404 HIST2H2BCQ6DN03 193 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms