RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 ABCA12Q86UK0 2595 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 TRAV8-3A0A0A6YYJ7 113 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 NDUFA1O15239 70 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 NPYP01303 97 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 ZNF726P1Q15940 193 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 Q6ZSV7 163 aa6.9□□□□□ -1.3
CD28-201ENST00000324106 C2CD3Q4AC94 2353 aa6.9□□□□□ -1.31
CD28-201ENST00000324106 A0A0J9YX75 114 aa6.9□□□□□ -1.31
CD28-201ENST00000324106 LYRM9A8MSI8 78 aa6.9□□□□□ -1.31
CD28-201ENST00000324106 C11orf71Q6IPW1 123 aa6.9□□□□□ -1.31
CD28-201ENST00000324106 PRRC2AP48634 2157 aaKnown RBP6.89□□□□□ -1.31
CD28-201ENST00000324106 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 CHD3Q12873 2000 aaKnown RBP6.89□□□□□ -1.31
CD28-201ENST00000324106 A0A1B0GV90 55 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 CXCL5P42830 114 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 RPL18AQ02543 176 aaKnown RBP6.89□□□□□ -1.31
CD28-201ENST00000324106 TMEM131Q92545 1883 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 COL4A4P53420 1690 aaPredicted RBP6.89□□□□□ -1.31
CD28-201ENST00000324106 J3QQQ9 107 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 RITA1Q96K30 269 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 A0A087X0K7 114 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 MAP6D1Q9H9H5 199 aa6.89□□□□□ -1.31
CD28-201ENST00000324106 IL15RAQ13261 267 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 Q8N1Y9 231 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 DEFB125Q8N687 156 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 MBD6Q96DN6 1003 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 TRBV20-1A0A075B6N2 111 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 VCANP13611 3396 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 WIPF3A6NGB9 483 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 EBI3Q14213 229 aa6.88□□□□□ -1.31
CD28-201ENST00000324106 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 CEP350Q5VT06 3117 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.87□□□□□ -1.31
CD28-201ENST00000324106 IGKV2-29A2NJV5 120 aaPredicted RBP6.87□□□□□ -1.31
CD28-201ENST00000324106 MIFP14174 115 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 ODF3L1Q8IXM7 274 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 USP9XQ93008 2570 aaPredicted RBP6.87□□□□□ -1.31
CD28-201ENST00000324106 HIST1H4AP62805 103 aaKnown RBP6.87□□□□□ -1.31
CD28-201ENST00000324106 ODF3Q96PU9 254 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 ESM1Q9NQ30 184 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 MRPL35Q9NZE8 188 aaKnown RBP6.87□□□□□ -1.31
CD28-201ENST00000324106 CDH23Q9H251 3354 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 LYPD6Q86Y78 171 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
CD28-201ENST00000324106 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 DSCR8Q96T75 97 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 ANKRD11Q6UB99 2663 aaPredicted RBP6.86□□□□□ -1.31
CD28-201ENST00000324106 HIST2H2BCQ6DN03 193 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 SPINK8P0C7L1 97 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 PATE2Q6UY27 113 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 KLK12Q9UKR0 248 aa6.86□□□□□ -1.31
CD28-201ENST00000324106 IGLV10-54A0A075B6I4 117 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 DEFB131BA0A096LNP1 70 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 GAGE2EQ4V326 116 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 UNQ9165/PRO28630Q6UXU0 137 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 PSMG3-AS1Q96PY0 264 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 GAGE2DQ9UEU5 116 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 NCOA6Q14686 2063 aaPredicted RBP6.85□□□□□ -1.31
CD28-201ENST00000324106 DEFB4AO15263 64 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 FGF6P10767 208 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 IFITM1P13164 125 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 UBE2AP49459 152 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 Q9H8V8 135 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 DNAH14Q0VDD8 3507 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 A0A1B0GV72 72 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 LINC01548A6NM66 108 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 IGLL1P15814 213 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 LINC01006Q8NI28 216 aa6.85□□□□□ -1.31
CD28-201ENST00000324106 PRSS47A8MTI9 375 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 H3BQ85 93 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 K7EQG2 157 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 LINC01545Q5VT33 79 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 TRAV10A0A0B4J240 114 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 C9JAW5 83 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
CD28-201ENST00000324106 GAGE2BQ13066 116 aa6.84□□□□□ -1.32
CD28-201ENST00000324106 MPV17L2Q567V2 206 aa6.84□□□□□ -1.32
CD28-201ENST00000324106 RNASE13Q5GAN3 156 aaKnown RBP6.84□□□□□ -1.32
CD28-201ENST00000324106 GAGE2AQ6NT46 116 aa6.84□□□□□ -1.32
CD28-201ENST00000324106 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.32
CD28-201ENST00000324106 MED12LQ86YW9 2145 aa6.83□□□□□ -1.32
CD28-201ENST00000324106 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
CD28-201ENST00000324106 TRBV12-3P01733 135 aa6.83□□□□□ -1.32
CD28-201ENST00000324106 FAM222AQ5U5X8 452 aa6.83□□□□□ -1.32
CD28-201ENST00000324106 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
CD28-201ENST00000324106 NDUFA7O95182 113 aa6.83□□□□□ -1.32
CD28-201ENST00000324106 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
CD28-201ENST00000324106 CCDC140Q96MF4 163 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms