RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 E7EQL1 145 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 H3BMM0 161 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 CGB3P0DN86 165 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 CGB7P0DN87 165 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 DAND5Q8N907 189 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 MBD3L2Q8NHZ7 208 aaPredicted RBP5.84□□□□□ -1.48
CDHR3-201ENST00000317716 UBE2WQ96B02 151 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 DUX5Q96PT3 197 aa5.84□□□□□ -1.48
CDHR3-201ENST00000317716 RBAKDNA6NC62 111 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 SDHAF1A6NFY7 115 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 TCL1BO95988 128 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 VMO1Q7Z5L0 202 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 MAPK1IP1LQ8NDC0 245 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 JPT2Q9H910 190 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 A0A096LNJ9 63 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 J3QQQ9 107 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 PAX8Q06710 450 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 DUX3Q96PT4 197 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 C7orf69Q9H7B7 122 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 KLK9Q9UKQ9 250 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 TNFRSF18Q9Y5U5 241 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 TEX22C9J3V5 150 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 ATP6V0E1O15342 81 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 DNAL4O96015 105 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 IGLV2-11P01706 119 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 GATA4P43694 442 aa5.83□□□□□ -1.48
CDHR3-201ENST00000317716 C11orf86A6NJI1 115 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 IGF1P05019 195 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 PMVKQ15126 192 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 CELSR2Q9HCU4 2923 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 IGHV3-38A0A0C4DH36 116 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 MYCNOSP40205 109 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 ID1P41134 155 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 CIRBPQ14011 172 aaKnown RBP5.82□□□□□ -1.48
CDHR3-201ENST00000317716 PAPPA-AS1Q5QFB9 102 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 HIGD1BQ9P298 99 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 J3QKU1 62 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 GAGE2AQ6NT46 116 aa5.82□□□□□ -1.48
CDHR3-201ENST00000317716 C11orf68Q9H3H3 251 aaKnown RBP5.82□□□□□ -1.48
CDHR3-201ENST00000317716 COX6B1P14854 86 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 CARD19Q96LW7 228 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 F8P00451 2351 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 ITPR3Q14573 2671 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 CFC1P0CG37 223 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 SYNJ2BPP57105 145 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 TAL2Q16559 108 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 CR1LQ2VPA4 569 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 ZNF493Q6ZR52 646 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 IGHV3-16A0A0C4DH30 117 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 A0A0J9YXV3 536 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 TEX49A0A1B0GTD5 131 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 VCYO14598 125 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 ATP5J2P56134 94 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 ADORA2A-AS1P86434 159 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 C19orf54Q5BKX5 351 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 MUSTN1Q8IVN3 82 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 TIMM21Q9BVV7 248 aa5.81□□□□□ -1.48
CDHR3-201ENST00000317716 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 OVOL3O00110 214 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 NPFFO15130 113 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 CLEC2BQ92478 149 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 EXPH5Q8NEV8 1989 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 C19orf84I3L1E1 186 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 CRYGCP07315 174 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
CDHR3-201ENST00000317716 BAALCQ8WXS3 180 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 MAST4O15021 2626 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 TRAV13-1A0A0B4J241 112 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 CCDC179H3BU77 68 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 SPINK13Q1W4C9 94 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 LINC01559Q495D7 138 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 TM2D2Q9BX73 214 aa5.8□□□□□ -1.48
CDHR3-201ENST00000317716 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-201ENST00000317716 WI2-2373I1.2A0A1W2PRP0 233 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 IGHV3-53P01767 116 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 CTSGP08311 255 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 SPENQ96T58 3664 aaKnown RBP5.79□□□□□ -1.48
CDHR3-201ENST00000317716 TRAV4A0A0B4J268 109 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 CHCHD5Q9BSY4 110 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 FLNAP21333 2647 aaKnown RBP5.79□□□□□ -1.48
CDHR3-201ENST00000317716 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 HOXD3P31249 432 aaPredicted RBP5.79□□□□□ -1.48
CDHR3-201ENST00000317716 RNF185Q96GF1 192 aa5.79□□□□□ -1.48
CDHR3-201ENST00000317716 COL27A1Q8IZC6 1860 aaPredicted RBP5.78□□□□□ -1.48
CDHR3-201ENST00000317716 NDUFA11Q86Y39 141 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 LINC00311Q8N616 119 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 RHPN1-AS1Q9BWJ2 59 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 HHLA3Q9XRX5 114 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 SAA4P35542 130 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 LINC01620Q4KN68 170 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 TCTEX1D4Q5JR98 221 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 Q6ZS46 218 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
CDHR3-201ENST00000317716 TRAV41A0A0B4J266 112 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms