RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 TMEM238C9JI98 176 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 CRYGCP07315 174 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 ZFYVE26Q68DK2 2539 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 K7EMT4 169 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 IGLV2-14P01704 120 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 FAM104BQ5XKR9 115 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 PATE2Q6UY27 113 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 SCRT2Q9NQ03 307 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 CHD8Q9HCK8 2581 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 LINC00587B1AMM8 73 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 CRYGDP07320 174 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 NPYP01303 97 aa6.84□□□□□ -1.31
CTC1-201ENST00000315684 TRAV1-1A0A0B4J248 108 aa6.84□□□□□ -1.32
CTC1-201ENST00000315684 ZNF493Q6ZR52 646 aa6.84□□□□□ -1.32
CTC1-201ENST00000315684 MSRB1Q9NZV6 116 aa6.84□□□□□ -1.32
CTC1-201ENST00000315684 PLXNB1O43157 2135 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 WI2-2373I1.2A0A1W2PRP0 233 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 CFPP27918 469 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 ESDP10768 282 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 ZC2HC1BQ5TFG8 222 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 GDF5OSQ5U4N7 250 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 MBD6Q96DN6 1003 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 TM2D2Q9BX73 214 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 JMJD1CQ15652 2540 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 TMEM89A2RUT3 159 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 PRR20EP86478 221 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 PRR20CP86479 221 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 PRR20DP86480 221 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 PRR20BP86481 221 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 PRR20AP86496 221 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 ZNF462Q96JM2 2506 aa6.83□□□□□ -1.32
CTC1-201ENST00000315684 G3V4G9 280 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 EDN2P20800 178 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
CTC1-201ENST00000315684 PSMG3-AS1Q96PY0 264 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 H3BUT2 72 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 UBE2AP49459 152 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 IGHV4-28A0A0C4DH34 117 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 IGHV4-30-4P0DP06 118 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 TRAV8-3A0A0A6YYJ7 113 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 A8MWP6 167 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
CTC1-201ENST00000315684 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
CTC1-201ENST00000315684 LY96Q9Y6Y9 160 aa6.82□□□□□ -1.32
CTC1-201ENST00000315684 COX7A2LO14548 114 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 SMIM6P0DI80 62 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 ANKRD11Q6UB99 2663 aaPredicted RBP6.81□□□□□ -1.32
CTC1-201ENST00000315684 A0A0J9YX75 114 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 Q8N8P6 123 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 UBE2CO00762 179 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 GFRA4Q9GZZ7 299 aa6.81□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 LTAP01374 205 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
CTC1-201ENST00000315684 PET117Q6UWS5 81 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 PRO0255Q9UI72 69 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 TRBV7-3A0A075B6L6 115 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 C9JQL5 133 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 A0A087X0K7 114 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 K7EN84 100 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 PSMB8P28062 276 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 BOD1L2Q8IYS8 172 aa6.8□□□□□ -1.32
CTC1-201ENST00000315684 NCR3O14931 201 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 PTPRBP23467 1997 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 RBAKDNA6NC62 111 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 GHRHP01286 108 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 ZNF479Q96JC4 524 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 DSCAML1Q8TD84 2053 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 BRCA2P51587 3418 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 DAZ2Q13117 558 aaKnown RBP6.79□□□□□ -1.32
CTC1-201ENST00000315684 KIR3DS1Q14943 382 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 DAZ4Q86SG3 579 aaKnown RBP6.79□□□□□ -1.32
CTC1-201ENST00000315684 LINC00269Q8N2A0 174 aa6.79□□□□□ -1.32
CTC1-201ENST00000315684 DAZ3Q9NR90 486 aaKnown RBP6.79□□□□□ -1.32
CTC1-201ENST00000315684 HERVK_113P63121 156 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 SH2D6Q7Z4S9 175 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 RNF152Q8N8N0 203 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 LY6LH3BQJ8 138 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
CTC1-201ENST00000315684 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
CTC1-201ENST00000315684 NDUFA12Q9UI09 145 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 V9GYV3 84 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 TRAV8-2A0A0B4J237 113 aa6.78□□□□□ -1.32
CTC1-201ENST00000315684 TRAV4A0A0B4J268 109 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms