RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 CD177Q8N6Q3 437 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 CLEC2BQ92478 149 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 CRIP1P50238 77 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 HIST1H4AP62805 103 aaKnown RBP9□□□□□ -0.97
LDLRAD3-201ENST00000315571 TENM4Q6N022 2769 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 LYNX1G3V0Z9 82 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 LY6HO94772 140 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 LYNX1P0DP58 116 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 RPL27AP46776 148 aaKnown RBP8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 HIST2H2BCQ6DN03 193 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 JPT2Q9H910 190 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 IGHV3-35A0A0C4DH35 117 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 C15orf65H3BRN8 121 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 SPRY2O43597 315 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 SYNJ2BPP57105 145 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 RHOHQ15669 191 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 Q6ZS46 218 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 SPANXCQ9NY87 97 aa8.99□□□□□ -0.97
LDLRAD3-201ENST00000315571 TMEM178BH3BS89 294 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 ATOX1O00244 68 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 EDN2P20800 178 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 UTF1Q5T230 341 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 PEMTQ9UBM1 199 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 U3KQK5 164 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 E7EUB6 86 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 FAM90A1Q86YD7 464 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 ARHGAP32A7KAX9 2087 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 CTSZQ9UBR2 303 aa8.98□□□□□ -0.97
LDLRAD3-201ENST00000315571 TRBV19A0A075B6N1 114 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 A0A0J9YY99 117 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 LHBP01229 141 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 ADARB2-AS1A8MUL3 147 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 IGHV3-33P01772 117 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 C8orf31Q8N9H6 132 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 METTL26Q96S19 204 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 OVOL3O00110 214 aa8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 C1orf229Q6ZS94 237 aaPredicted RBP8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 GCN1Q92616 2671 aaKnown RBP8.97□□□□□ -0.97
LDLRAD3-201ENST00000315571 J3QQQ9 107 aa8.96□□□□□ -0.97
LDLRAD3-201ENST00000315571 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.97
LDLRAD3-201ENST00000315571 SPG11Q96JI7 2443 aa8.96□□□□□ -0.97
LDLRAD3-201ENST00000315571 DSCAMO60469 2012 aa8.96□□□□□ -0.97
LDLRAD3-201ENST00000315571 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
LDLRAD3-201ENST00000315571 LINC00643Q86TS7 51 aa8.96□□□□□ -0.98
LDLRAD3-201ENST00000315571 CCL13Q99616 98 aa8.96□□□□□ -0.98
LDLRAD3-201ENST00000315571 HRNRQ86YZ3 2850 aaPredicted RBP8.96□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGKV1D-37A0A075B6S9 117 aa8.96□□□□□ -0.98
LDLRAD3-201ENST00000315571 PFN2P35080 140 aa8.96□□□□□ -0.98
LDLRAD3-201ENST00000315571 TRGV3P03979 118 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGKV1D-17A0A075B6S4 117 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 KRTAP10-9P60411 292 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 TEX36Q5VZQ5 186 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 A0A0U1RRA0 63 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 SBSPONQ8IVN8 264 aa8.95□□□□□ -0.98
LDLRAD3-201ENST00000315571 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 OVOL1O14753 267 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 DNAL4O96015 105 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 TMEM258P61165 79 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 BAALCQ8WXS3 180 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 DPH3Q96FX2 82 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 PTPN13Q12923 2485 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 TRIAP1O43715 76 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 RNF182Q8N6D2 247 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 FAM216BQ8N7L0 139 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 SPANXDQ9BXN6 97 aa8.94□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGHV3OR16-13A0A075B7E8 117 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGHV3-74A0A0B4J1X5 117 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 H3BT86 120 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGHV3-30P01768 117 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 IGHV3-30-5P0DP03 117 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 SDIM1Q6ZPB5 146 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 RNF125Q96EQ8 232 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 CENPEQ02224 2701 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 ACYP1P07311 99 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 CRYGBP07316 175 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 SUMO2P61956 95 aaKnown RBP8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 THAP8Q8NA92 274 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 RNF185Q96GF1 192 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 LRBAP50851 2863 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 LINC01619G3V211 115 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 GAFA1Q96PS6 74 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 PHLDA3Q9Y5J5 127 aa8.93□□□□□ -0.98
LDLRAD3-201ENST00000315571 H7C423 109 aa8.92□□□□□ -0.98
LDLRAD3-201ENST00000315571 NDUFB3O43676 98 aa8.92□□□□□ -0.98
LDLRAD3-201ENST00000315571 ATP5G1P05496 136 aa8.92□□□□□ -0.98
LDLRAD3-201ENST00000315571 UBE2E1P51965 193 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms