RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 LTAP01374 205 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 MUC22E2RYF6 1773 aaPredicted RBP10.39□□□□□ -0.75
RFFL-201ENST00000315249 RNF183Q96D59 192 aa10.39□□□□□ -0.75
RFFL-201ENST00000315249 CRYGCP07315 174 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 HIST1H4AP62805 103 aaKnown RBP10.38□□□□□ -0.75
RFFL-201ENST00000315249 CAMK2N2Q96S95 79 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 ZNF503Q96F45 646 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 CDSNQ15517 529 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 MORN5Q5VZ52 161 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 NDUFA12Q9UI09 145 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 ADAMTS20P59510 1910 aa10.38□□□□□ -0.75
RFFL-201ENST00000315249 TLN2Q9Y4G6 2542 aa10.37□□□□□ -0.75
RFFL-201ENST00000315249 C2orf82Q6UX34 121 aa10.37□□□□□ -0.75
RFFL-201ENST00000315249 C18orf32Q8TCD1 76 aa10.37□□□□□ -0.75
RFFL-201ENST00000315249 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
RFFL-201ENST00000315249 PRAC2D3DTV9 90 aa10.37□□□□□ -0.75
RFFL-201ENST00000315249 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
RFFL-201ENST00000315249 Q6ZSV7 163 aa10.37□□□□□ -0.75
RFFL-201ENST00000315249 IGHG4P01861 327 aa10.36□□□□□ -0.75
RFFL-201ENST00000315249 ANKRD11Q6UB99 2663 aaPredicted RBP10.36□□□□□ -0.75
RFFL-201ENST00000315249 DAZ2Q13117 558 aaKnown RBP10.36□□□□□ -0.75
RFFL-201ENST00000315249 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
RFFL-201ENST00000315249 Q6ZSR3 168 aa10.36□□□□□ -0.75
RFFL-201ENST00000315249 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
RFFL-201ENST00000315249 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
RFFL-201ENST00000315249 OVOL2Q9BRP0 275 aa10.36□□□□□ -0.75
RFFL-201ENST00000315249 MAP6D1Q9H9H5 199 aa10.36□□□□□ -0.75
RFFL-201ENST00000315249 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
RFFL-201ENST00000315249 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 FAM231DQ6ZW35 169 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 TIRAPP58753 221 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 LINC00482Q8N8I6 264 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 GATA1P15976 413 aaPredicted RBP10.35□□□□□ -0.75
RFFL-201ENST00000315249 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 MYO9AB2RTY4 2548 aa10.35□□□□□ -0.75
RFFL-201ENST00000315249 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 ZNF462Q96JM2 2506 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 COX7A2LO14548 114 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 PKIGQ9Y2B9 76 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 UBE2CO00762 179 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 HILS1P60008 231 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 FANCD2OSQ96PS1 177 aa10.34□□□□□ -0.75
RFFL-201ENST00000315249 MRPL35Q9NZE8 188 aaKnown RBP10.34□□□□□ -0.75
RFFL-201ENST00000315249 TRBV7-3A0A075B6L6 115 aa10.33□□□□□ -0.75
RFFL-201ENST00000315249 ODF3BA8MYP8 253 aa10.33□□□□□ -0.75
RFFL-201ENST00000315249 ADCYAP1P18509 176 aa10.33□□□□□ -0.76
RFFL-201ENST00000315249 FN1P02751 2386 aaKnown RBP10.33□□□□□ -0.76
RFFL-201ENST00000315249 PATE2Q6UY27 113 aa10.33□□□□□ -0.76
RFFL-201ENST00000315249 K7EN84 100 aa10.33□□□□□ -0.76
RFFL-201ENST00000315249 PRB2P02812 416 aaPredicted RBP10.33□□□□□ -0.76
RFFL-201ENST00000315249 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
RFFL-201ENST00000315249 KRTAP10-9P60411 292 aa10.33□□□□□ -0.76
RFFL-201ENST00000315249 C21orf62-AS1Q17RA5 79 aa10.33□□□□□ -0.76
RFFL-201ENST00000315249 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
RFFL-201ENST00000315249 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
RFFL-201ENST00000315249 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
RFFL-201ENST00000315249 MRPL36Q9P0J6 103 aaKnown RBP10.32□□□□□ -0.76
RFFL-201ENST00000315249 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 IGLV2-14P01704 120 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 MDFICQ9P1T7 246 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 NDUFAF3Q9BU61 184 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 Q6ZWC4 215 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 UTF1Q5T230 341 aa10.31□□□□□ -0.76
RFFL-201ENST00000315249 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.31□□□□□ -0.76
RFFL-201ENST00000315249 DEFB131BA0A096LNP1 70 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 F8VRH5 84 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 EML5Q05BV3 1969 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 CCDC140Q96MF4 163 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 C9JAW5 83 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 ABCA12Q86UK0 2595 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 Q9H8V8 135 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 CPAMD8Q8IZJ3 1885 aa10.3□□□□□ -0.76
RFFL-201ENST00000315249 ETDCA0A1B0GVM5 59 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 KIR3DS1Q14943 382 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 ZNF124Q15973 351 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 MPV17L2Q567V2 206 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 Q0VG73 95 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 DEFB114Q30KQ6 69 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 FAM222AQ5U5X8 452 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 TNRC6BQ9UPQ9 1833 aaKnown RBP10.29□□□□□ -0.76
RFFL-201ENST00000315249 A0A0J9YX75 114 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 PRO0255Q9UI72 69 aa10.29□□□□□ -0.76
RFFL-201ENST00000315249 LINC01006Q8NI28 216 aa10.28□□□□□ -0.76
RFFL-201ENST00000315249 J3QQQ9 107 aa10.28□□□□□ -0.76
RFFL-201ENST00000315249 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
RFFL-201ENST00000315249 DNAH12Q6ZR08 3092 aa10.28□□□□□ -0.76
RFFL-201ENST00000315249 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms