RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 C15orf54Q8N8G6 183 aa7.64□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 SLC25A29Q8N8R3 303 aa7.64□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 DYNC2H1Q8NCM8 4307 aaKnown RBP7.64□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 A8MWL6 223 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 C9JQL5 133 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 TRGC1P0CF51 173 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 IFITM2Q01629 132 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 CT83Q5H943 113 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 LYZL1Q6UWQ5 148 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 BORCS7Q96B45 105 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 SAMD10Q9BYL1 202 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 LINC00588Q9Y4M8 146 aa7.63□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 IGLV2-18A0A075B6J9 118 aa7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 LOC100131303A0A0U1RQF7 123 aa7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 CTRLP40313 264 aa7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 RPL23P62829 140 aaKnown RBP7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 ESRGQ1W209 222 aa7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 ISOC2Q96AB3 205 aa7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 OSTCQ9NRP0 149 aa7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 MRPS16Q9Y3D3 137 aaKnown RBP7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 CRYGDP07320 174 aa7.61□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 MGPP08493 103 aa7.61□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 UFSP1Q6NVU6 142 aa7.61□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 C14orf178Q8N769 122 aaPredicted RBP7.61□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 GAGE12JA6NER3 117 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 F5H697 171 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 M0R2N4 97 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 RAB4BP61018 213 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 GAGE1Q13065 139 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 GAGE4Q13068 117 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 GAGE5Q13069 117 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 TWIST1Q15672 202 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 GAGE13Q4V321 117 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 WDR73Q6P4I2 378 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 SMIM15Q7Z3B0 74 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 OR10G8Q8NGN5 311 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 ZNRF2Q8NHG8 242 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 TSKUQ8WUA8 353 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 UPK3BQ9BT76 320 aa7.6□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 KMT2CQ8NEZ4 4911 aaKnown RBP7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 TRBV10-1A0A0K0K1A3 114 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 NTF3P20783 257 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 TTC32Q5I0X7 151 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 UQCC3Q6UW78 93 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 LYPD5Q6UWN5 251 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 ATP6V0E2Q8NHE4 81 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 GFRA4Q9GZZ7 299 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
CSPG4P1Y-201ENST00000306641 HIGD1CA8MV81 97 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 H7C1H1 209 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 SIVA1O15304 175 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 PNRC1Q12796 327 aaPredicted RBP7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 Q6ZSN1 163 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 Q9H8V8 135 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 MSRB1Q9NZV6 116 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 V9GYV3 84 aa7.58□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 TRAV8-6A0A0B4J262 113 aa7.57□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 FAM231BA6NCW3 169 aa7.57□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 TIRAPP58753 221 aa7.57□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 COMMD7Q86VX2 200 aa7.57□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 GTSF1LQ9H1H1 148 aa7.57□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 NBDYA0A0U1RRE5 68 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 A0A1B0GUT8 65 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 PPP1R2P9O14990 202 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 EVI2AP22794 236 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 FOXA3P55318 350 aaPredicted RBP7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 OR10J3Q5JRS4 329 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 NAT8BQ9UHF3 227 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 F8W036 122 aa7.55□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 LINC00694P0DN24 101 aa7.55□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 RIGQ13278 110 aa7.55□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 LELP1Q5T871 98 aa7.55□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 KMT2AQ03164 3969 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 TRAV9-2A0A087WT02 112 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 A0A087WWC5 75 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 Q6ZR54 194 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 WFDC10BQ8IUB3 73 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 NEXN-AS1Q8NBZ9 246 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 DNAJC30Q96LL9 226 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 TNFRSF18Q9Y5U5 241 aa7.54□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 TMEM218A2RU14 115 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 UBE2D3P61077 147 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 UBE2D2P62837 147 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 C1orf134Q5TEV5 83 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 NUP35Q8NFH5 326 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
CSPG4P1Y-201ENST00000306641 Q9UF83 564 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms