RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PRO1854Q9UHT4 67 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 NDUFA1O15239 70 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 ADAMTSL5Q6ZMM2 481 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 SIGLEC8Q9NYZ4 499 aa6.53□□□□□ -1.36
PCDHB1-201ENST00000306549 IGLV2-23P01705 113 aa6.52□□□□□ -1.36
PCDHB1-201ENST00000306549 LINC01545Q5VT33 79 aa6.52□□□□□ -1.36
PCDHB1-201ENST00000306549 WIPF2Q8TF74 440 aaPredicted RBP6.52□□□□□ -1.36
PCDHB1-201ENST00000306549 WFDC1Q9HC57 220 aa6.52□□□□□ -1.36
PCDHB1-201ENST00000306549 CTSZQ9UBR2 303 aa6.52□□□□□ -1.36
PCDHB1-201ENST00000306549 F6UB75 175 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 HLA-DMBP28068 263 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 C14orf132Q9NPU4 83 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 IGKV1-6A0A0C4DH72 117 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 PROP1O75360 226 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 H3BRN7 92 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 LTAP01374 205 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 WFDC9Q8NEX5 89 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 PRR25Q96S07 402 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 C17orf77Q96MU5 243 aa6.52□□□□□ -1.37
PCDHB1-201ENST00000306549 C5orf24Q7Z6I8 188 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 RSPO3Q9BXY4 272 aaPredicted RBP6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 C16orf54Q6UWD8 224 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 ANKRD29Q8N6D5 301 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 CARD19Q96LW7 228 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 CXCL5P42830 114 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 USP24Q9UPU5 2620 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 F8VRH5 84 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 C3orf79P0CE67 100 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 CASC2Q6XLA1 102 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 NAA38Q9BRA0 125 aaKnown RBP6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 IGLC7A0M8Q6 106 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 J3QQQ9 107 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 K7EQD1 137 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 IGLC1P0CG04 106 aa6.51□□□□□ -1.37
PCDHB1-201ENST00000306549 NREPQ16612 68 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 GTSF1LQ9H1H1 148 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 KIR2DL5BA0A0G2JN68 375 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 KIR2DL5BA0A0G2JPC4 375 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 H0YGX0 51 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGLV1-47P01700 117 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IFITM1P13164 125 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 KIR2DL5AQ8N109 375 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 PRSS47A8MTI9 375 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV4-31P0DP07 118 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 TMEM213A2RRL7 107 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 WT1-ASQ06250 92 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 HIST3H2BBQ8N257 126 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 CFAP46Q8IYW2 2715 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV7-81A0A0B4J1V7 117 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 SIRPDQ9H106 197 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 F8W1H4 67 aa6.5□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 IGLV11-55A0A075B6I3 123 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 LMO4P61968 165 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 Q0VG73 95 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 ACYP1P07311 99 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV4-4A0A075B6R2 117 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 NDUFS7O75251 213 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 HIST2H2BCQ6DN03 193 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 Q6YL49 198 aa6.49□□□□□ -1.37
PCDHB1-201ENST00000306549 Q8N9W7 124 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 Q9H8V8 135 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 IGHV4-28A0A0C4DH34 117 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 HIGD2BQ4VC39 106 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 UBE2V1Q13404 147 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 C5orf38Q86SI9 138 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 ZNF524Q96C55 264 aa6.48□□□□□ -1.37
PCDHB1-201ENST00000306549 H0Y9J4 135 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 LGALS9BQ3B8N2 356 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 LGALS9CQ6DKI2 356 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 C11orf71Q6IPW1 123 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 BAALC-AS2P0C853 105 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 HHLA3Q9XRX5 114 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 NDUFC2O95298 119 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 DYNAPQ8N1N2 210 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 DNAH12Q6ZR08 3092 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 IGF1P05019 195 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 LINC01620Q4KN68 170 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 COX7B2Q8TF08 81 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 TRAV26-2A0A0B4J265 109 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 LGALS9O00182 355 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 CRYBA4P53673 196 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 Q6ZVH6 145 aa6.47□□□□□ -1.37
PCDHB1-201ENST00000306549 POLR3KQ9Y2Y1 108 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms