RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 MBD3L1Q8WWY6 194 aa10.5□□□□□ -0.73
FANCA-201ENST00000305699 EIF5AP63241 154 aaKnown RBP10.49□□□□□ -0.73
FANCA-201ENST00000305699 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
FANCA-201ENST00000305699 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
FANCA-201ENST00000305699 A0A087WWL8 130 aa10.48□□□□□ -0.73
FANCA-201ENST00000305699 S100A9P06702 114 aaKnown RBP10.48□□□□□ -0.73
FANCA-201ENST00000305699 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
FANCA-201ENST00000305699 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
FANCA-201ENST00000305699 Q9UF83 564 aa10.48□□□□□ -0.73
FANCA-201ENST00000305699 SCO2A0A1W2PP80 73 aa10.47□□□□□ -0.73
FANCA-201ENST00000305699 H2AFB1P0C5Y9 115 aa10.47□□□□□ -0.73
FANCA-201ENST00000305699 ZFP82Q8N141 532 aa10.47□□□□□ -0.73
FANCA-201ENST00000305699 SFRP2Q96HF1 295 aa10.47□□□□□ -0.73
FANCA-201ENST00000305699 TMUB2Q71RG4 321 aa10.46□□□□□ -0.74
FANCA-201ENST00000305699 Q8N3U1 123 aa10.46□□□□□ -0.74
FANCA-201ENST00000305699 A0A087WWC5 75 aa10.45□□□□□ -0.74
FANCA-201ENST00000305699 KRTAP10-1P60331 282 aa10.45□□□□□ -0.74
FANCA-201ENST00000305699 RPL19P84098 196 aaKnown RBP10.45□□□□□ -0.74
FANCA-201ENST00000305699 LAGE3Q14657 143 aa10.45□□□□□ -0.74
FANCA-201ENST00000305699 BAGE2Q86Y30 109 aa10.45□□□□□ -0.74
FANCA-201ENST00000305699 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
FANCA-201ENST00000305699 LRCOL1A6NCL2 159 aa10.44□□□□□ -0.74
FANCA-201ENST00000305699 GCSHP23434 173 aa10.44□□□□□ -0.74
FANCA-201ENST00000305699 PRR27Q6MZM9 219 aa10.44□□□□□ -0.74
FANCA-201ENST00000305699 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
FANCA-201ENST00000305699 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
FANCA-201ENST00000305699 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
FANCA-201ENST00000305699 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
FANCA-201ENST00000305699 GNG13Q9P2W3 67 aa10.42□□□□□ -0.74
FANCA-201ENST00000305699 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 XGP55808 180 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 RPL36AP83881 106 aaKnown RBP10.41□□□□□ -0.74
FANCA-201ENST00000305699 TOR2AQ5JU69 321 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 Q8N814 137 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 OR10AG1Q8NH19 301 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
FANCA-201ENST00000305699 RPL36ALQ969Q0 106 aaKnown RBP10.41□□□□□ -0.74
FANCA-201ENST00000305699 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 MANBALQ9NQG1 85 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 FAT1Q14517 4588 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 RPL35P42766 123 aaKnown RBP10.41□□□□□ -0.74
FANCA-201ENST00000305699 CCL20P78556 96 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 ZNF56Q15929 161 aa10.41□□□□□ -0.74
FANCA-201ENST00000305699 EIF5AL1Q6IS14 154 aaKnown RBP10.41□□□□□ -0.74
FANCA-201ENST00000305699 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 TRBV10-1A0A0K0K1A3 114 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 TEX46H3BTG2 121 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 CXCL1P09341 107 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 SSTP61278 116 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 SPANXN1Q5VSR9 72 aa10.4□□□□□ -0.75
FANCA-201ENST00000305699 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
FANCA-201ENST00000305699 RAB5CP51148 216 aa10.39□□□□□ -0.75
FANCA-201ENST00000305699 KCNIP4Q6PIL6 250 aa10.39□□□□□ -0.75
FANCA-201ENST00000305699 NIT1Q86X76 327 aa10.39□□□□□ -0.75
FANCA-201ENST00000305699 DERL1Q9BUN8 251 aa10.39□□□□□ -0.75
FANCA-201ENST00000305699 A0A087WX48 190 aa10.38□□□□□ -0.75
FANCA-201ENST00000305699 LECT2O14960 151 aa10.38□□□□□ -0.75
FANCA-201ENST00000305699 RAB4BP61018 213 aa10.38□□□□□ -0.75
FANCA-201ENST00000305699 UBE2D3P61077 147 aa10.38□□□□□ -0.75
FANCA-201ENST00000305699 UBE2D2P62837 147 aa10.38□□□□□ -0.75
FANCA-201ENST00000305699 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 F5H697 171 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 SNAI2O43623 268 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 FRZBQ92765 325 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 C11orf52Q96A22 123 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 RMI2Q96E14 147 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 KLK12Q9UKR0 248 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 VPS13BQ7Z7G8 4022 aa10.37□□□□□ -0.75
FANCA-201ENST00000305699 DNAH8Q96JB1 4490 aa10.36□□□□□ -0.75
FANCA-201ENST00000305699 HAMPP81172 84 aa10.36□□□□□ -0.75
FANCA-201ENST00000305699 WFDC2Q14508 124 aa10.36□□□□□ -0.75
FANCA-201ENST00000305699 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
FANCA-201ENST00000305699 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
FANCA-201ENST00000305699 COX11Q9Y6N1 276 aa10.36□□□□□ -0.75
FANCA-201ENST00000305699 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
FANCA-201ENST00000305699 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 SULT1A2P50226 295 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 ELOBQ15370 118 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 Q5VSD8 79 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.35□□□□□ -0.75
FANCA-201ENST00000305699 NEXN-AS1Q8NBZ9 246 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 OR10G8Q8NGN5 311 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 TPPP3Q9BW30 176 aa10.35□□□□□ -0.75
FANCA-201ENST00000305699 RAB19A4D1S5 217 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 IFNA1P01562 189 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 GNG4P50150 75 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 TCTE3Q8IZS6 198 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 BAALCQ8WXS3 180 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 DNAJC30Q96LL9 226 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
FANCA-201ENST00000305699 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms