RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 DAD1P61803 113 aa6.67□□□□□ -1.34
RFX3-201ENST00000302303 CACNG7P62955 275 aa6.67□□□□□ -1.34
RFX3-201ENST00000302303 SPANXN1Q5VSR9 72 aa6.67□□□□□ -1.34
RFX3-201ENST00000302303 Q9UF83 564 aa6.67□□□□□ -1.34
RFX3-201ENST00000302303 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 SCO1O75880 301 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 ELOBQ15370 118 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 GATD1Q8NB37 220 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 URGCP-MRPS24S4R325 110 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 TRGV2A0A075B6R0 118 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 A0A087WWL8 130 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 TEX48A0A1B0GUV7 120 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 A8MWV9 139 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 TWIST1Q15672 202 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
RFX3-201ENST00000302303 TMEM88Q6PEY1 159 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 CBLN2Q8IUK8 224 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 C14orf178Q8N769 122 aaPredicted RBP6.66□□□□□ -1.34
RFX3-201ENST00000302303 SYT8Q8NBV8 401 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 RNF185Q96GF1 192 aa6.66□□□□□ -1.34
RFX3-201ENST00000302303 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.34
RFX3-201ENST00000302303 TGIF2-C20orf24A0A0A6YYL0 155 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 S100A1P23297 94 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 VSIG2Q96IQ7 327 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 BTF3L4Q96K17 158 aa6.65□□□□□ -1.35
RFX3-201ENST00000302303 TRBV24-1A0A075B6N3 115 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 TRAV9-1A0A075B6T8 112 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 GAS8-AS1O95177 125 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 ATP5G1P05496 136 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 GATA1P15976 413 aaPredicted RBP6.64□□□□□ -1.35
RFX3-201ENST00000302303 RIGQ13278 110 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 ATP5L2Q7Z4Y8 100 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 TMEM191AQ9H0A3 160 aa6.64□□□□□ -1.35
RFX3-201ENST00000302303 PLECQ15149 4684 aaKnown RBP6.63□□□□□ -1.35
RFX3-201ENST00000302303 DEFB131BA0A096LNP1 70 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 RAB4AP20338 218 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 CAMPP49913 170 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 CRYBA4P53673 196 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 TNP2Q05952 138 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 TMEM136Q6ZRR5 245 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 PHLDA1Q8WV24 401 aaPredicted RBP6.63□□□□□ -1.35
RFX3-201ENST00000302303 AP1S3Q96PC3 154 aa6.63□□□□□ -1.35
RFX3-201ENST00000302303 LOC100131303A0A0U1RQF7 123 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 COLCA2A8K830 154 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 CIDEAO60543 219 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 TRGC1P0CF51 173 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 P0DMU3 169 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 FAM231AP0DMU4 169 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 FAM231CP0DMU5 169 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 HBBP68871 147 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 FAM74A4Q5TZK3 123 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 FAM104BQ5XKR9 115 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 KCNIP4Q6PIL6 250 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 AMN1Q8IY45 258 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 WWC2-AS2Q96NR7 200 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 SMCO4Q9NRQ5 59 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 HHLA3Q9XRX5 114 aa6.62□□□□□ -1.35
RFX3-201ENST00000302303 TRAV10A0A0B4J240 114 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 A0A1B0GW15 77 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 TRBV6-4A0A1B0GX49 114 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 F5H768 121 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 M0QY20 66 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 HTN3P15516 51 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 RAB4BP61018 213 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 RASL11AQ6T310 242 aa6.61□□□□□ -1.35
RFX3-201ENST00000302303 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 TRAV26-2A0A0B4J265 109 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 RHODO00212 210 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 LINC00694P0DN24 101 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 S100PP25815 95 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 SLAQ13239 276 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 MRPL51Q4U2R6 128 aaKnown RBP6.6□□□□□ -1.35
RFX3-201ENST00000302303 SUMO4Q6EEV6 95 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
RFX3-201ENST00000302303 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 DNAH1Q9P2D7 4330 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 A0A0J9YY99 117 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
RFX3-201ENST00000302303 MUC7Q8TAX7 377 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 GNB1LQ9BYB4 327 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
RFX3-201ENST00000302303 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 H3BNG1 76 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 PHOX2AO14813 284 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 MGPP08493 103 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 ZNF56Q15929 161 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 NRACQ8N912 160 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 NEXN-AS1Q8NBZ9 246 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 FAM210BQ96KR6 192 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 APLNQ9ULZ1 77 aa6.59□□□□□ -1.35
RFX3-201ENST00000302303 TENM2Q9NT68 2774 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms