RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 SUMO4Q6EEV6 95 aa17.96■□□□□ 0.47
FOXA3-201ENST00000302177 TMEM141Q96I45 108 aa17.96■□□□□ 0.47
FOXA3-201ENST00000302177 TRAV12-3A0A0B4J271 114 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 A0A0J9YX75 114 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 IGHV4-59P01825 116 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 C12orf74Q32Q52 190 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 KIR2DL4Q99706 377 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 SVEP1Q4LDE5 3571 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 IGIPA6NJ69 53 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 K7EQG2 157 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 TMEM95Q3KNT9 176 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 ZFP2Q6ZN57 461 aa17.95■□□□□ 0.46
FOXA3-201ENST00000302177 A0A1B0GWB2 263 aa17.94■□□□□ 0.46
FOXA3-201ENST00000302177 IGLL5B9A064 214 aa17.94■□□□□ 0.46
FOXA3-201ENST00000302177 K7ERJ3 54 aa17.94■□□□□ 0.46
FOXA3-201ENST00000302177 UNC79Q9P2D8 2635 aa17.94■□□□□ 0.46
FOXA3-201ENST00000302177 IGHV3-16A0A0C4DH30 117 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 RNF152Q8N8N0 203 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 SYT8Q8NBV8 401 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 TIMM17AQ99595 171 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 TRBV27A0A0K0K1C4 114 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 CRYGDP07320 174 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 RIPPLY3P57055 190 aa17.93■□□□□ 0.46
FOXA3-201ENST00000302177 G3V4G9 280 aa17.92■□□□□ 0.46
FOXA3-201ENST00000302177 DUSP14O95147 198 aaKnown RBP17.92■□□□□ 0.46
FOXA3-201ENST00000302177 COX6B1P14854 86 aa17.92■□□□□ 0.46
FOXA3-201ENST00000302177 PRADC1Q9BSG0 188 aa17.92■□□□□ 0.46
FOXA3-201ENST00000302177 MUC4Q99102 2169 aa17.92■□□□□ 0.46
FOXA3-201ENST00000302177 LGALS1P09382 135 aaKnown RBP17.91■□□□□ 0.46
FOXA3-201ENST00000302177 PMVKQ15126 192 aa17.91■□□□□ 0.46
FOXA3-201ENST00000302177 TP53TG1Q9Y2A0 90 aa17.91■□□□□ 0.46
FOXA3-201ENST00000302177 ZNF688P0C7X2 276 aa17.91■□□□□ 0.46
FOXA3-201ENST00000302177 JPT2Q9H910 190 aa17.91■□□□□ 0.46
FOXA3-201ENST00000302177 SELENOKQ9Y6D0 94 aa17.91■□□□□ 0.46
FOXA3-201ENST00000302177 F5H697 171 aa17.9■□□□□ 0.46
FOXA3-201ENST00000302177 SAP30O75446 220 aa17.9■□□□□ 0.46
FOXA3-201ENST00000302177 TSHBP01222 138 aa17.9■□□□□ 0.46
FOXA3-201ENST00000302177 ELANEP08246 267 aa17.9■□□□□ 0.46
FOXA3-201ENST00000302177 FOXI2Q6ZQN5 318 aa17.9■□□□□ 0.46
FOXA3-201ENST00000302177 A0A096LNT2 108 aa17.89■□□□□ 0.45
FOXA3-201ENST00000302177 SDHAF1A6NFY7 115 aa17.89■□□□□ 0.45
FOXA3-201ENST00000302177 ZNF479Q96JC4 524 aa17.89■□□□□ 0.45
FOXA3-201ENST00000302177 IGHV1OR15-1A0A075B7D0 117 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 A0A087WWL8 130 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 HERVK_113P61574 105 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 FBN2P35556 2912 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 ABCA12Q86UK0 2595 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 IGLV4-69A0A075B6H9 119 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 CYSRT1A8MQ03 144 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 C21orf62-AS1Q17RA5 79 aa17.88■□□□□ 0.45
FOXA3-201ENST00000302177 CSMD2Q7Z408 3487 aa17.87■□□□□ 0.45
FOXA3-201ENST00000302177 C10orf99Q6UWK7 81 aa17.87■□□□□ 0.45
FOXA3-201ENST00000302177 WFDC12Q8WWY7 111 aa17.87■□□□□ 0.45
FOXA3-201ENST00000302177 ITPR2Q14571 2701 aa17.87■□□□□ 0.45
FOXA3-201ENST00000302177 SCGB2A2Q13296 93 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 UBE2E2Q96LR5 201 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 MDFICQ9P1T7 246 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 NOTCH2Q04721 2471 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 ZNF815PA8K554 130 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 F8W1H4 67 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 M0QY20 66 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 RRN3P1Q2M238 152 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 Q8N1Y9 231 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 VPREB3Q9UKI3 123 aa17.86■□□□□ 0.45
FOXA3-201ENST00000302177 RHOHQ15669 191 aa17.85■□□□□ 0.45
FOXA3-201ENST00000302177 TMEM238LA0A1B0GVL6 79 aa17.84■□□□□ 0.45
FOXA3-201ENST00000302177 C11orf86A6NJI1 115 aa17.84■□□□□ 0.45
FOXA3-201ENST00000302177 A6NJY4 79 aa17.84■□□□□ 0.45
FOXA3-201ENST00000302177 TRPT1Q86TN4 253 aaKnown RBP17.84■□□□□ 0.45
FOXA3-201ENST00000302177 SYNJ2BPP57105 145 aa17.84■□□□□ 0.45
FOXA3-201ENST00000302177 NSUN5P1Q3KNT7 163 aa17.84■□□□□ 0.45
FOXA3-201ENST00000302177 ZNF256Q9Y2P7 627 aaPredicted RBP17.84■□□□□ 0.45
FOXA3-201ENST00000302177 HOXA3O43365 443 aaPredicted RBP17.83■□□□□ 0.44
FOXA3-201ENST00000302177 TRAV12-2A0A075B6T6 113 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 TGFAP01135 160 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 ZNF876PQ49A33 203 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 Q6YL49 198 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 ZFHX3Q15911 3703 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 TRGV11A0A075B6L2 103 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 FSHBP01225 129 aa17.82■□□□□ 0.44
FOXA3-201ENST00000302177 RPL39P62891 51 aaKnown RBP17.81■□□□□ 0.44
FOXA3-201ENST00000302177 CD300EQ496F6 205 aaPredicted RBP17.81■□□□□ 0.44
FOXA3-201ENST00000302177 FAM74A4Q5TZK3 123 aa17.81■□□□□ 0.44
FOXA3-201ENST00000302177 MORN3Q6PF18 240 aaPredicted RBP17.81■□□□□ 0.44
FOXA3-201ENST00000302177 AMTNQ6UX39 209 aa17.81■□□□□ 0.44
FOXA3-201ENST00000302177 SCGB1D4Q6XE38 83 aa17.81■□□□□ 0.44
FOXA3-201ENST00000302177 NRGNQ92686 78 aa17.81■□□□□ 0.44
FOXA3-201ENST00000302177 APCP25054 2843 aa17.81■□□□□ 0.44
FOXA3-201ENST00000302177 IGKV3-20P01619 116 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 ZNF56Q15929 161 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 SPINK13Q1W4C9 94 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 HOXD3P31249 432 aaPredicted RBP17.8■□□□□ 0.44
FOXA3-201ENST00000302177 KRTAP10-9P60411 292 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 COTL1Q14019 142 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 ZNF702PQ9H963 129 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 POLQO75417 2590 aa17.8■□□□□ 0.44
FOXA3-201ENST00000302177 EDA2RQ9HAV5 297 aa17.79■□□□□ 0.44
FOXA3-201ENST00000302177 NFE4Q86UQ8 179 aa17.79■□□□□ 0.44
FOXA3-201ENST00000302177 SRSF9Q13242 221 aaKnown RBP eCLIP17.78■□□□□ 0.44
FOXA3-201ENST00000302177 SPANXB1Q9NS25 103 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms