RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 HIST1H2BAQ96A08 127 aa3.87□□□□□ -1.79
PATL1-201ENST00000300146 TRAV4A0A0B4J268 109 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 RBAKDNA6NC62 111 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 HLA-DQA1P01909 254 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 RHOHQ15669 191 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 Q6AWC8 147 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 EIF5AL1Q6IS14 154 aaKnown RBP3.86□□□□□ -1.79
PATL1-201ENST00000300146 RASL10AQ92737 203 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 LGALS9BQ3B8N2 356 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 LINC00336Q6ZUF6 198 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 BAALCQ8WXS3 180 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 RNASE7Q9H1E1 156 aaKnown RBP3.86□□□□□ -1.79
PATL1-201ENST00000300146 ANGP03950 147 aaKnown RBP3.86□□□□□ -1.79
PATL1-201ENST00000300146 ODF1Q14990 250 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 MAPKAPK5-AS1Q8N8E1 139 aa3.86□□□□□ -1.79
PATL1-201ENST00000300146 P01737 135 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 Q6ZR54 194 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 FAM19A4Q96LR4 140 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 UMAD1C9J7I0 102 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 IFNA1P01562 189 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 SEC11BP0C7V7 166 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 TWIST1Q15672 202 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 MRPS16Q9Y3D3 137 aaKnown RBP3.85□□□□□ -1.79
PATL1-201ENST00000300146 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 LENEPQ9Y5L5 61 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 NMBP08949 121 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
PATL1-201ENST00000300146 RPL36ALQ969Q0 106 aaKnown RBP3.85□□□□□ -1.79
PATL1-201ENST00000300146 ZFP30Q9Y2G7 519 aa3.85□□□□□ -1.79
PATL1-201ENST00000300146 GATA1P15976 413 aaPredicted RBP3.84□□□□□ -1.79
PATL1-201ENST00000300146 FOXA3P55318 350 aaPredicted RBP3.84□□□□□ -1.79
PATL1-201ENST00000300146 FMC1Q96HJ9 113 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 PGLYRP4Q96LB8 373 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 KRTAP4-5Q9BYR2 181 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 A8MWV9 139 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 IGLV2-8P01709 118 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 MED14OSP0DP75 135 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 ERVFC1-1P60608 527 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
PATL1-201ENST00000300146 NKX6-2Q9C056 277 aaPredicted RBP3.84□□□□□ -1.79
PATL1-201ENST00000300146 GTSF1LQ9H1H1 148 aa3.84□□□□□ -1.79
PATL1-201ENST00000300146 HMSDA8MTL9 139 aa3.84□□□□□ -1.8
PATL1-201ENST00000300146 CRPP02741 224 aa3.84□□□□□ -1.8
PATL1-201ENST00000300146 MEF2BQ02080 365 aaPredicted RBP3.84□□□□□ -1.8
PATL1-201ENST00000300146 SLC51BQ86UW2 128 aa3.84□□□□□ -1.8
PATL1-201ENST00000300146 DNAH10Q8IVF4 4471 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 IGLV5-52A0A0A0MRZ9 124 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 LYZL1Q6UWQ5 148 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 ZFP82Q8N141 532 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 FER1L6-AS1Q8NA97 138 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 PARLQ9H300 379 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 KRBOX1C9JBD0 128 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 TDRG1Q3Y452 100 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.83□□□□□ -1.8
PATL1-201ENST00000300146 DNAH17Q9UFH2 4485 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 NTF3P20783 257 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 LINC00612Q8N6U2 182 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 CLRN3Q8NCR9 226 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 SMIM7Q9BQ49 75 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
PATL1-201ENST00000300146 RS1O15537 224 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 CAMPP49913 170 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 WFDC2Q14508 124 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 ADIRFQ15847 76 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 OCC1Q8TAD7 63 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 IL36BQ9NZH7 164 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 ZNF727A8MUV8 499 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 SULT1A2P50226 295 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 C9orf85Q96MD7 179 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 GATCO43716 136 aaKnown RBP3.82□□□□□ -1.8
PATL1-201ENST00000300146 BCL2P10415 239 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 ZNF345Q14585 488 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 MBD3L1Q8WWY6 194 aa3.82□□□□□ -1.8
PATL1-201ENST00000300146 UBE2L6O14933 153 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 LTAP01374 205 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 AMMECR1LQ6DCA0 310 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 NUDT10Q8NFP7 164 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 LINC00526Q96FQ7 95 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 NUDT11Q96G61 164 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 DNAH2Q9P225 4427 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 TRBV20OR9-2A0A075B6H5 130 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 A0A087WTM6 91 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 Q6ZNX1 250 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 SMIM15Q7Z3B0 74 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 SLC7A5P1Q8MH63 180 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 C1orf43Q9BWL3 253 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 VAX2Q9UIW0 290 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 TRBV7-9A0A0J9YWB2 115 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 TRBV6-4A0A1B0GX49 114 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 XKRY2A2RUG3 117 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
PATL1-201ENST00000300146 LINC00269Q8N2A0 174 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 AP1S3Q96PC3 154 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 MANBALQ9NQG1 85 aa3.81□□□□□ -1.8
PATL1-201ENST00000300146 TRBV7-3A0A075B6L6 115 aa3.8□□□□□ -1.8
PATL1-201ENST00000300146 NCR2O95944 276 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms