RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 IGHV3-16A0A0C4DH30 117 aa15.09■□□□□ 0.01
SMCO4-201ENST00000298966 CBY3A6NI87 242 aa15.09■□□□□ 0.01
SMCO4-201ENST00000298966 RBMY1A1P0DJD3 496 aaKnown RBP15.09■□□□□ 0.01
SMCO4-201ENST00000298966 RBMY1CP0DJD4 496 aa15.09■□□□□ 0.01
SMCO4-201ENST00000298966 RNASE3P12724 160 aaKnown RBP15.09■□□□□ 0.01
SMCO4-201ENST00000298966 RBMY1FQ15415 496 aaKnown RBP15.09■□□□□ 0.01
SMCO4-201ENST00000298966 SMIM15Q7Z3B0 74 aa15.09■□□□□ 0.01
SMCO4-201ENST00000298966 DYNC1H1Q14204 4646 aaKnown RBP15.09■□□□□ 0.01
SMCO4-201ENST00000298966 PKHD1P08F94 4074 aa15.09■□□□□ 0.01
SMCO4-201ENST00000298966 FAT2Q9NYQ8 4349 aa15.08■□□□□ 0.01
SMCO4-201ENST00000298966 ABCA13Q86UQ4 5058 aa15.08■□□□□ 0.01
SMCO4-201ENST00000298966 GNRH2O43555 120 aa15.08■□□□□ 0
SMCO4-201ENST00000298966 ZNF415Q09FC8 603 aa15.08■□□□□ 0
SMCO4-201ENST00000298966 SLAQ13239 276 aa15.08■□□□□ 0
SMCO4-201ENST00000298966 SPANXN1Q5VSR9 72 aa15.08■□□□□ 0
SMCO4-201ENST00000298966 C9orf85Q96MD7 179 aa15.08■□□□□ 0
SMCO4-201ENST00000298966 LOC105371267A0A1B0GV96 52 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 C5orf52A6NGY3 159 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 NXPH4O95158 308 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 NTF3P20783 257 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 TWIST1Q15672 202 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 COA6Q5JTJ3 125 aaKnown RBP15.07■□□□□ 0
SMCO4-201ENST00000298966 PIK3CD-AS1Q5SR53 167 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 C1orf158Q8N1D5 194 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 SYT8Q8NBV8 401 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 PTH2Q96A98 100 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 NDUFAF3Q9BU61 184 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 DNAH11Q96DT5 4516 aa15.07■□□□□ 0
SMCO4-201ENST00000298966 GIG44P09565 113 aaPredicted RBP15.06■□□□□ 0
SMCO4-201ENST00000298966 NDUFA6P56556 154 aa15.06■□□□□ 0
SMCO4-201ENST00000298966 SPXQ9BT56 116 aa15.06■□□□□ 0
SMCO4-201ENST00000298966 TMEM191AQ9H0A3 160 aa15.06■□□□□ 0
SMCO4-201ENST00000298966 DMRTA1Q5VZB9 504 aa15.05■□□□□ -0
SMCO4-201ENST00000298966 ZNF705AQ6ZN79 300 aaPredicted RBP15.05■□□□□ -0
SMCO4-201ENST00000298966 CSNK1G2-AS1Q8NCQ2 148 aa15.05■□□□□ -0
SMCO4-201ENST00000298966 OR10AG1Q8NH19 301 aa15.05■□□□□ -0
SMCO4-201ENST00000298966 C11orf68Q9H3H3 251 aaKnown RBP15.05■□□□□ -0
SMCO4-201ENST00000298966 DNAH2Q9P225 4427 aa15.05■□□□□ -0
SMCO4-201ENST00000298966 SNRPEP62304 92 aaKnown RBP15.04■□□□□ -0
SMCO4-201ENST00000298966 TMEM263Q8WUH6 116 aaKnown RBP15.04■□□□□ -0
SMCO4-201ENST00000298966 SMIM9A6NGZ8 99 aa15.03■□□□□ -0
SMCO4-201ENST00000298966 IGLL5B9A064 214 aa15.03■□□□□ -0
SMCO4-201ENST00000298966 HOXA5P20719 270 aa15.03■□□□□ -0
SMCO4-201ENST00000298966 Q0VG73 95 aa15.03■□□□□ -0
SMCO4-201ENST00000298966 AP1S3Q96PC3 154 aa15.03■□□□□ -0
SMCO4-201ENST00000298966 APLNQ9ULZ1 77 aa15.03■□□□□ -0
SMCO4-201ENST00000298966 MUC21A0A0G2JKD1 596 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 MUC21A0A140T8X8 626 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 A0A1B0GVY2 172 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 KIAA1644Q3SXP7 199 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 OR10J3Q5JRS4 329 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 FAM104BQ5XKR9 115 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 OR11H2Q8NH07 326 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 C16orf74Q96GX8 76 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 MDFICQ9P1T7 246 aa15.02■□□□□ -0
SMCO4-201ENST00000298966 SRIP30626 198 aa15.01□□□□□ -0.01
SMCO4-201ENST00000298966 ALKBH7Q9BT30 221 aaPredicted RBP15.01□□□□□ -0.01
SMCO4-201ENST00000298966 TIMM8BQ9Y5J9 83 aaPredicted RBP15.01□□□□□ -0.01
SMCO4-201ENST00000298966 M0R2P5 195 aa15□□□□□ -0.01
SMCO4-201ENST00000298966 RRN3P1Q2M238 152 aa15□□□□□ -0.01
SMCO4-201ENST00000298966 C11orf72Q8NBR9 251 aa15□□□□□ -0.01
SMCO4-201ENST00000298966 MSRB1Q9NZV6 116 aa15□□□□□ -0.01
SMCO4-201ENST00000298966 M0R381 172 aa14.99□□□□□ -0.01
SMCO4-201ENST00000298966 PPBPP02775 128 aa14.99□□□□□ -0.01
SMCO4-201ENST00000298966 HTN1P15515 57 aa14.99□□□□□ -0.01
SMCO4-201ENST00000298966 RNASE8Q8TDE3 154 aaKnown RBP14.99□□□□□ -0.01
SMCO4-201ENST00000298966 DPH3P1Q9H4G8 78 aa14.99□□□□□ -0.01
SMCO4-201ENST00000298966 IGHV3OR16-12A0A075B7B8 117 aa14.98□□□□□ -0.01
SMCO4-201ENST00000298966 DEFB4AO15263 64 aa14.97□□□□□ -0.01
SMCO4-201ENST00000298966 SMIM17P0DL12 118 aa14.97□□□□□ -0.01
SMCO4-201ENST00000298966 SSTP61278 116 aa14.97□□□□□ -0.01
SMCO4-201ENST00000298966 PRSS29PA6NIE9 313 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 DAZ2Q13117 558 aaKnown RBP14.96□□□□□ -0.01
SMCO4-201ENST00000298966 LGALS9BQ3B8N2 356 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 ZNF876PQ49A33 203 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 AMN1Q8IY45 258 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 HIST3H2BBQ8N257 126 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 C18orf32Q8TCD1 76 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 GSN-AS1Q9NRJ2 163 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 LAMTOR2Q9Y2Q5 125 aa14.96□□□□□ -0.01
SMCO4-201ENST00000298966 A8MWV9 139 aa14.95□□□□□ -0.02
SMCO4-201ENST00000298966 RAB4AP20338 218 aa14.95□□□□□ -0.02
SMCO4-201ENST00000298966 MRPL51Q4U2R6 128 aaKnown RBP14.95□□□□□ -0.02
SMCO4-201ENST00000298966 RNF185Q96GF1 192 aa14.95□□□□□ -0.02
SMCO4-201ENST00000298966 ESDP10768 282 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 EVI2AP22794 236 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 BAGE3Q86Y29 109 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 ORMDL3Q8N138 153 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 RASL10AQ92737 203 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 MRAP2Q96G30 205 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 PKD1P98161 4303 aa14.94□□□□□ -0.02
SMCO4-201ENST00000298966 CIDEAO60543 219 aa14.92□□□□□ -0.02
SMCO4-201ENST00000298966 PPP1R17O96001 155 aa14.92□□□□□ -0.02
SMCO4-201ENST00000298966 AZU1P20160 251 aa14.92□□□□□ -0.02
SMCO4-201ENST00000298966 POM121L12Q8N7R1 296 aa14.92□□□□□ -0.02
SMCO4-201ENST00000298966 D6R8Y8 96 aa14.91□□□□□ -0.02
SMCO4-201ENST00000298966 RHODO00212 210 aa14.91□□□□□ -0.02
SMCO4-201ENST00000298966 CKS2P33552 79 aa14.91□□□□□ -0.02
SMCO4-201ENST00000298966 PRELID3AQ96N28 172 aa14.91□□□□□ -0.02
SMCO4-201ENST00000298966 TRAV10A0A0B4J240 114 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms