RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 U3KQK5 164 aa17.66■□□□□ 0.42
GTF2A1-201ENST00000298173 ALKBH7Q9BT30 221 aaPredicted RBP17.65■□□□□ 0.42
GTF2A1-201ENST00000298173 SAMD10Q9BYL1 202 aa17.65■□□□□ 0.42
GTF2A1-201ENST00000298173 NOP10Q9NPE3 64 aaKnown RBP17.65■□□□□ 0.42
GTF2A1-201ENST00000298173 MRPL16Q9NX20 251 aaKnown RBP17.65■□□□□ 0.42
GTF2A1-201ENST00000298173 TP53TG1Q9Y2A0 90 aa17.65■□□□□ 0.42
GTF2A1-201ENST00000298173 NACAE9PAV3 2078 aa17.65■□□□□ 0.42
GTF2A1-201ENST00000298173 A8MWV9 139 aa17.63■□□□□ 0.41
GTF2A1-201ENST00000298173 SRIP30626 198 aa17.63■□□□□ 0.41
GTF2A1-201ENST00000298173 A0A087WWL8 130 aa17.62■□□□□ 0.41
GTF2A1-201ENST00000298173 MIFP14174 115 aa17.62■□□□□ 0.41
GTF2A1-201ENST00000298173 Q6ZTI0 123 aa17.62■□□□□ 0.41
GTF2A1-201ENST00000298173 TRGV1A0A0A0MS02 117 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 UFSP1Q6NVU6 142 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 Q8NAQ8 132 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 D6R8Y8 96 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 RS1O15537 224 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 SMIM17P0DL12 118 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 CFAP126Q5VTH2 177 aa17.61■□□□□ 0.41
GTF2A1-201ENST00000298173 GAS8-AS1O95177 125 aa17.6■□□□□ 0.41
GTF2A1-201ENST00000298173 PPBPP02775 128 aa17.6■□□□□ 0.41
GTF2A1-201ENST00000298173 SBSPONQ8IVN8 264 aa17.6■□□□□ 0.41
GTF2A1-201ENST00000298173 IGHV4-28A0A0C4DH34 117 aa17.59■□□□□ 0.41
GTF2A1-201ENST00000298173 CKS2P33552 79 aa17.59■□□□□ 0.41
GTF2A1-201ENST00000298173 ORMDL3Q8N138 153 aa17.59■□□□□ 0.41
GTF2A1-201ENST00000298173 Q0VG73 95 aa17.58■□□□□ 0.41
GTF2A1-201ENST00000298173 DEFB121Q5J5C9 76 aa17.58■□□□□ 0.41
GTF2A1-201ENST00000298173 LINC00612Q8N6U2 182 aa17.58■□□□□ 0.41
GTF2A1-201ENST00000298173 MRAP2Q96G30 205 aa17.58■□□□□ 0.41
GTF2A1-201ENST00000298173 SMKR1H3BMG3 65 aa17.58■□□□□ 0.4
GTF2A1-201ENST00000298173 EMP1P54849 157 aa17.58■□□□□ 0.4
GTF2A1-201ENST00000298173 C18orf32Q8TCD1 76 aa17.58■□□□□ 0.4
GTF2A1-201ENST00000298173 TRAV26-2A0A0B4J265 109 aa17.57■□□□□ 0.4
GTF2A1-201ENST00000298173 FAM74A4Q5TZK3 123 aa17.57■□□□□ 0.4
GTF2A1-201ENST00000298173 MGPP08493 103 aa17.56■□□□□ 0.4
GTF2A1-201ENST00000298173 OR10J3Q5JRS4 329 aa17.56■□□□□ 0.4
GTF2A1-201ENST00000298173 COA6Q5JTJ3 125 aaKnown RBP17.56■□□□□ 0.4
GTF2A1-201ENST00000298173 PRELID3AQ96N28 172 aa17.56■□□□□ 0.4
GTF2A1-201ENST00000298173 RETNQ9HD89 108 aa17.56■□□□□ 0.4
GTF2A1-201ENST00000298173 NCR2O95944 276 aa17.55■□□□□ 0.4
GTF2A1-201ENST00000298173 GATA1P15976 413 aaPredicted RBP17.55■□□□□ 0.4
GTF2A1-201ENST00000298173 NDUFA6P56556 154 aa17.55■□□□□ 0.4
GTF2A1-201ENST00000298173 ZFP2Q6ZN57 461 aa17.55■□□□□ 0.4
GTF2A1-201ENST00000298173 NRACQ8N912 160 aa17.55■□□□□ 0.4
GTF2A1-201ENST00000298173 LAMTOR2Q9Y2Q5 125 aa17.55■□□□□ 0.4
GTF2A1-201ENST00000298173 TRAV4A0A0B4J268 109 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 GAGE12BA1L429 117 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 GAGE7O76087 117 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 GAGE12FP0CL80 117 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 GAGE12GP0CL81 117 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 GAGE12IP0CL82 117 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 SUMO4Q6EEV6 95 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 C18orf15Q96N68 181 aa17.54■□□□□ 0.4
GTF2A1-201ENST00000298173 LYRM9A8MSI8 78 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 RHODO00212 210 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 DEFB4AO15263 64 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 NPYP01303 97 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 OR4C5Q8NGB2 326 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 TM2D3Q9BRN9 247 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 DKK2Q9UBU2 259 aa17.53■□□□□ 0.4
GTF2A1-201ENST00000298173 F5H697 171 aa17.52■□□□□ 0.4
GTF2A1-201ENST00000298173 TNFRSF6BO95407 300 aa17.52■□□□□ 0.39
GTF2A1-201ENST00000298173 IQCJQ1A5X6 159 aa17.52■□□□□ 0.39
GTF2A1-201ENST00000298173 FAM222AQ5U5X8 452 aa17.52■□□□□ 0.39
GTF2A1-201ENST00000298173 ZNF479Q96JC4 524 aa17.52■□□□□ 0.39
GTF2A1-201ENST00000298173 EDA2RQ9HAV5 297 aa17.52■□□□□ 0.39
GTF2A1-201ENST00000298173 IGHV3-73A0A0B4J1V6 119 aa17.51■□□□□ 0.39
GTF2A1-201ENST00000298173 C5orf52A6NGY3 159 aa17.51■□□□□ 0.39
GTF2A1-201ENST00000298173 M0QY20 66 aa17.51■□□□□ 0.39
GTF2A1-201ENST00000298173 S100A6P06703 90 aa17.51■□□□□ 0.39
GTF2A1-201ENST00000298173 ZNF56Q15929 161 aa17.51■□□□□ 0.39
GTF2A1-201ENST00000298173 PRSS47A8MTI9 375 aa17.5■□□□□ 0.39
GTF2A1-201ENST00000298173 Q6ZSN1 163 aa17.5■□□□□ 0.39
GTF2A1-201ENST00000298173 TRGV2A0A075B6R0 118 aa17.49■□□□□ 0.39
GTF2A1-201ENST00000298173 CIDEAO60543 219 aa17.49■□□□□ 0.39
GTF2A1-201ENST00000298173 LINC00310P59036 64 aa17.49■□□□□ 0.39
GTF2A1-201ENST00000298173 SNRPEP62304 92 aaKnown RBP17.49■□□□□ 0.39
GTF2A1-201ENST00000298173 BAGE3Q86Y29 109 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 MRAPQ8TCY5 172 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 RPL39LQ96EH5 51 aaKnown RBP17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 URB1-AS1Q96HZ7 61 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 SPATA25Q9BR10 227 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 IGHV3-53P01767 116 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 DEFB130BP0DP73 79 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 DEFB130AP0DP74 79 aa17.48■□□□□ 0.39
GTF2A1-201ENST00000298173 NUPR1O60356 82 aa17.47■□□□□ 0.39
GTF2A1-201ENST00000298173 PPP1R17O96001 155 aa17.47■□□□□ 0.39
GTF2A1-201ENST00000298173 HOXA5P20719 270 aa17.46■□□□□ 0.39
GTF2A1-201ENST00000298173 NIT1Q86X76 327 aa17.46■□□□□ 0.39
GTF2A1-201ENST00000298173 CELA1Q9UNI1 258 aa17.46■□□□□ 0.39
GTF2A1-201ENST00000298173 SPART-AS1P0CW21 52 aa17.45■□□□□ 0.38
GTF2A1-201ENST00000298173 C11orf68Q9H3H3 251 aaKnown RBP17.45■□□□□ 0.38
GTF2A1-201ENST00000298173 SERF1AO75920 110 aa17.45■□□□□ 0.38
GTF2A1-201ENST00000298173 ESDP10768 282 aa17.45■□□□□ 0.38
GTF2A1-201ENST00000298173 C20orf78Q9BR46 151 aa17.45■□□□□ 0.38
GTF2A1-201ENST00000298173 TRBV6-5A0A0K0K1A5 114 aa17.44■□□□□ 0.38
GTF2A1-201ENST00000298173 MAP1LC3AQ9H492 121 aa17.44■□□□□ 0.38
GTF2A1-201ENST00000298173 NIT2Q9NQR4 276 aa17.44■□□□□ 0.38
GTF2A1-201ENST00000298173 TENM3Q9P273 2699 aa17.43■□□□□ 0.38
GTF2A1-201ENST00000298173 LOC389332A0A1B0GUA5 103 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms