RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ANKRD29Q8N6D5 301 aa11.84□□□□□ -0.51
UBAP1-201ENST00000297661 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
UBAP1-201ENST00000297661 CD7P09564 240 aa11.84□□□□□ -0.51
UBAP1-201ENST00000297661 CITED1Q99966 193 aa11.84□□□□□ -0.51
UBAP1-201ENST00000297661 LMO4P61968 165 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 ANXA2RQ3ZCQ2 193 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 TEX15Q9BXT5 2789 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.83□□□□□ -0.522e-7■■■■■ 41.3
UBAP1-201ENST00000297661 CENPVL3A0A0U1RRI6 287 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 TMEM262E9PQX1 116 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 IGF1P05019 195 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 SBSPONQ8IVN8 264 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
UBAP1-201ENST00000297661 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
UBAP1-201ENST00000297661 NPFFO15130 113 aa11.82□□□□□ -0.52
UBAP1-201ENST00000297661 SLC25A16P16260 332 aa11.82□□□□□ -0.52
UBAP1-201ENST00000297661 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
UBAP1-201ENST00000297661 NDUFA11Q86Y39 141 aa11.82□□□□□ -0.52
UBAP1-201ENST00000297661 NEXN-AS1Q8NBZ9 246 aa11.82□□□□□ -0.52
UBAP1-201ENST00000297661 TRBV12-3P01733 135 aa11.81□□□□□ -0.52
UBAP1-201ENST00000297661 PDZD2O15018 2839 aa11.81□□□□□ -0.52
UBAP1-201ENST00000297661 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
UBAP1-201ENST00000297661 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
UBAP1-201ENST00000297661 SRD5A1P18405 259 aa11.81□□□□□ -0.52
UBAP1-201ENST00000297661 CREBBPQ92793 2442 aa11.81□□□□□ -0.52
UBAP1-201ENST00000297661 CYSRT1A8MQ03 144 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 KLHL30-AS1Q8NEE0 82 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 METTL26Q96S19 204 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 TRBV7-9A0A0J9YWB2 115 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 C5orf56Q8N8D9 126 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 RHODO00212 210 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 LY6EQ16553 131 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 PRR9Q5T870 116 aa11.8□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 UNQ9165/PRO28630Q6UXU0 137 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 RASL10AQ92737 203 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 SCGB1C2P0DMR2 95 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 NDUFV3P56181 108 aaKnown RBP11.79□□□□□ -0.52
UBAP1-201ENST00000297661 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 C16orf92Q96LL3 132 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
UBAP1-201ENST00000297661 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 IGHV7-4-1A0A0J9YVY3 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 CCDC179H3BU77 68 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 HERV-K104P63124 156 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 BAALCQ8WXS3 180 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE7O76087 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 GAGE4Q13068 117 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 ORMDL2Q53FV1 153 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 SLC50A1Q9BRV3 221 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 ACANP16112 2415 aa11.78□□□□□ -0.52
UBAP1-201ENST00000297661 ZANQ9Y493 2812 aa11.77□□□□□ -0.52
UBAP1-201ENST00000297661 TRAV41A0A0B4J266 112 aa11.77□□□□□ -0.53
UBAP1-201ENST00000297661 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.53
UBAP1-201ENST00000297661 SNCGO76070 127 aa11.77□□□□□ -0.53
UBAP1-201ENST00000297661 SLC25A20O43772 301 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 CFC1BP0CG36 223 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 CFC1P0CG37 223 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 SMIM20Q8N5G0 67 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 FAM110AQ9BQ89 295 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 A0A0J9YY99 117 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 IGHV4-39P01824 125 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
UBAP1-201ENST00000297661 CCL19Q99731 98 aa11.76□□□□□ -0.53
UBAP1-201ENST00000297661 CRLF1O75462 422 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 TRBV7-1A0A0A6YYK4 115 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 F6UB75 175 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 ARL3P36405 182 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 RPL32P62910 135 aaKnown RBP11.75□□□□□ -0.53
UBAP1-201ENST00000297661 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 ITPR3Q14573 2671 aa11.75□□□□□ -0.53
UBAP1-201ENST00000297661 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 C9JAW5 83 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 ASIPP42127 132 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 SUMO2P61956 95 aaKnown RBP11.74□□□□□ -0.53
UBAP1-201ENST00000297661 M0R381 172 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 CRIP2P52943 208 aaPredicted RBP11.74□□□□□ -0.53
UBAP1-201ENST00000297661 Q6ZS46 218 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
UBAP1-201ENST00000297661 IGHV4-38-2P0DP08 117 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 IFITM1P13164 125 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 IGHV4-61A0A0C4DH41 118 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 IGHV3-30P01768 117 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 IGHV3-30-5P0DP03 117 aa11.73□□□□□ -0.53
UBAP1-201ENST00000297661 PRO1854Q9UHT4 67 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms