RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 GAGE5Q13069 117 aa13.93□□□□□ -0.18
RAB28-201ENST00000288723 GAGE13Q4V321 117 aa13.93□□□□□ -0.18
RAB28-201ENST00000288723 CRYGDP07320 174 aa13.92□□□□□ -0.18
RAB28-201ENST00000288723 S100A1P23297 94 aa13.92□□□□□ -0.18
RAB28-201ENST00000288723 BLOC1S1P78537 153 aa13.92□□□□□ -0.18
RAB28-201ENST00000288723 ATP6V0E2Q8NHE4 81 aa13.92□□□□□ -0.18
RAB28-201ENST00000288723 KIAA1109Q2LD37 5005 aa13.91□□□□□ -0.18
RAB28-201ENST00000288723 RHODO00212 210 aa13.91□□□□□ -0.18
RAB28-201ENST00000288723 MED14OSP0DP75 135 aa13.91□□□□□ -0.18
RAB28-201ENST00000288723 CXCL1P09341 107 aa13.9□□□□□ -0.18
RAB28-201ENST00000288723 GZMBP10144 247 aa13.9□□□□□ -0.18
RAB28-201ENST00000288723 TIRAPP58753 221 aa13.9□□□□□ -0.18
RAB28-201ENST00000288723 DNAH11Q96DT5 4516 aa13.9□□□□□ -0.18
RAB28-201ENST00000288723 DNAH10OSP0CZ25 163 aa13.9□□□□□ -0.18
RAB28-201ENST00000288723 DAZAP1Q96EP5 407 aaKnown RBP13.9□□□□□ -0.18
RAB28-201ENST00000288723 SSBP4Q9BWG4 385 aaPredicted RBP13.9□□□□□ -0.18
RAB28-201ENST00000288723 SNAI2O43623 268 aa13.89□□□□□ -0.19
RAB28-201ENST00000288723 EVI2AP22794 236 aa13.89□□□□□ -0.19
RAB28-201ENST00000288723 TAGLN2P37802 199 aaKnown RBP13.89□□□□□ -0.19
RAB28-201ENST00000288723 OR10J3Q5JRS4 329 aa13.89□□□□□ -0.19
RAB28-201ENST00000288723 GTSF1LQ9H1H1 148 aa13.89□□□□□ -0.19
RAB28-201ENST00000288723 TRAV9-2A0A087WT02 112 aa13.88□□□□□ -0.19
RAB28-201ENST00000288723 C19orf71A6NCJ1 209 aa13.88□□□□□ -0.19
RAB28-201ENST00000288723 SPANXN1Q5VSR9 72 aa13.88□□□□□ -0.19
RAB28-201ENST00000288723 Q6ZRN7 208 aaPredicted RBP13.88□□□□□ -0.19
RAB28-201ENST00000288723 OR2D3Q8NGH3 330 aa13.88□□□□□ -0.19
RAB28-201ENST00000288723 DYNC1H1Q14204 4646 aaKnown RBP13.88□□□□□ -0.19
RAB28-201ENST00000288723 IGHV3-38A0A0C4DH36 116 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 LINC00694P0DN24 101 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 LYPD6BQ8NI32 183 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 SMIM12Q96EX1 92 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 TPPP3Q9BW30 176 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 BTF3P20290 206 aaKnown RBP13.87□□□□□ -0.19
RAB28-201ENST00000288723 NDUFA5Q16718 116 aa13.87□□□□□ -0.19
RAB28-201ENST00000288723 TRAV8-6A0A0B4J262 113 aa13.86□□□□□ -0.19
RAB28-201ENST00000288723 LELP1Q5T871 98 aa13.86□□□□□ -0.19
RAB28-201ENST00000288723 P01737 135 aa13.85□□□□□ -0.19
RAB28-201ENST00000288723 MSRB1Q9NZV6 116 aa13.85□□□□□ -0.19
RAB28-201ENST00000288723 FER1L6-AS1Q8NA97 138 aa13.84□□□□□ -0.19
RAB28-201ENST00000288723 OCC1Q8TAD7 63 aa13.84□□□□□ -0.19
RAB28-201ENST00000288723 K7EN84 100 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 IGHV3-30P01768 117 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 IGHV3-33P01772 117 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 IGLC6P0CF74 106 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 IGHV3-30-3P0DP02 117 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 IGHV3-30-5P0DP03 117 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 CEBPGP53567 150 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 ZNF56Q15929 161 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 NUDT10Q8NFP7 164 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 NUDT11Q96G61 164 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 HERC2O95714 4834 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 RPS20P60866 119 aaKnown RBP13.83□□□□□ -0.2
RAB28-201ENST00000288723 LINC01556Q5JQF7 62 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 TOR2AQ5JU69 321 aa13.83□□□□□ -0.2
RAB28-201ENST00000288723 K7EP13 123 aa13.82□□□□□ -0.2
RAB28-201ENST00000288723 SPATA12Q7Z6I5 190 aa13.82□□□□□ -0.2
RAB28-201ENST00000288723 Q8N3U1 123 aa13.82□□□□□ -0.2
RAB28-201ENST00000288723 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
RAB28-201ENST00000288723 TMEM250H0YL14 139 aa13.81□□□□□ -0.2
RAB28-201ENST00000288723 RAB4BP61018 213 aa13.81□□□□□ -0.2
RAB28-201ENST00000288723 EIF5A2Q9GZV4 153 aaKnown RBP13.81□□□□□ -0.2
RAB28-201ENST00000288723 RNASE7Q9H1E1 156 aaKnown RBP13.81□□□□□ -0.2
RAB28-201ENST00000288723 C16orf90A8MZG2 172 aa13.8□□□□□ -0.2
RAB28-201ENST00000288723 F5H697 171 aa13.8□□□□□ -0.2
RAB28-201ENST00000288723 NFE4Q86UQ8 179 aa13.8□□□□□ -0.2
RAB28-201ENST00000288723 C10orf126Q8N4M7 172 aa13.8□□□□□ -0.2
RAB28-201ENST00000288723 KRTAP10-2P60368 255 aa13.8□□□□□ -0.2
RAB28-201ENST00000288723 KIF25-AS1Q9Y6Z4 181 aa13.8□□□□□ -0.2
RAB28-201ENST00000288723 TRBV10-1A0A0K0K1A3 114 aa13.79□□□□□ -0.2
RAB28-201ENST00000288723 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
RAB28-201ENST00000288723 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
RAB28-201ENST00000288723 LYZL1Q6UWQ5 148 aa13.79□□□□□ -0.2
RAB28-201ENST00000288723 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
RAB28-201ENST00000288723 TRBV7-3A0A075B6L6 115 aa13.78□□□□□ -0.2
RAB28-201ENST00000288723 AP1S3Q96PC3 154 aa13.78□□□□□ -0.2
RAB28-201ENST00000288723 SMIM17P0DL12 118 aa13.78□□□□□ -0.2
RAB28-201ENST00000288723 UBE2D3P61077 147 aa13.78□□□□□ -0.2
RAB28-201ENST00000288723 UBE2D2P62837 147 aa13.78□□□□□ -0.2
RAB28-201ENST00000288723 Q9HAA7 133 aa13.78□□□□□ -0.2
RAB28-201ENST00000288723 A0A087WWC5 75 aa13.77□□□□□ -0.21
RAB28-201ENST00000288723 IBA57-AS1B1ANH7 110 aa13.77□□□□□ -0.21
RAB28-201ENST00000288723 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.21
RAB28-201ENST00000288723 RPP21Q9H633 154 aaKnown RBP13.77□□□□□ -0.21
RAB28-201ENST00000288723 FUSP35637 526 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAB28-201ENST00000288723 F2Z2F3 143 aa13.76□□□□□ -0.21
RAB28-201ENST00000288723 MGPP08493 103 aa13.76□□□□□ -0.21
RAB28-201ENST00000288723 CACNG7P62955 275 aa13.76□□□□□ -0.21
RAB28-201ENST00000288723 OR10G8Q8NGN5 311 aa13.76□□□□□ -0.21
RAB28-201ENST00000288723 NTF3P20783 257 aa13.75□□□□□ -0.21
RAB28-201ENST00000288723 ERVFC1-1P60608 527 aa13.75□□□□□ -0.21
RAB28-201ENST00000288723 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
RAB28-201ENST00000288723 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
RAB28-201ENST00000288723 SRP19P09132 144 aaKnown RBP13.74□□□□□ -0.21
RAB28-201ENST00000288723 TEX261Q6UWH6 196 aa13.74□□□□□ -0.21
RAB28-201ENST00000288723 SMIM7Q9BQ49 75 aa13.74□□□□□ -0.21
RAB28-201ENST00000288723 LRP1BQ9NZR2 4599 aa13.73□□□□□ -0.21
RAB28-201ENST00000288723 A0A087WTM6 91 aa13.73□□□□□ -0.21
RAB28-201ENST00000288723 CTRLP40313 264 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 365.2 ms