RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 GZMBP10144 247 aa17.21■□□□□ 0.35
PDF-201ENST00000288022 TPPP3Q9BW30 176 aa17.21■□□□□ 0.35
PDF-201ENST00000288022 SSBP4Q9BWG4 385 aaPredicted RBP17.21■□□□□ 0.35
PDF-201ENST00000288022 GAGE12JA6NER3 117 aa17.2■□□□□ 0.34
PDF-201ENST00000288022 CRYGDP07320 174 aa17.2■□□□□ 0.34
PDF-201ENST00000288022 GAGE1Q13065 139 aa17.2■□□□□ 0.34
PDF-201ENST00000288022 GAGE4Q13068 117 aa17.2■□□□□ 0.34
PDF-201ENST00000288022 GAGE5Q13069 117 aa17.2■□□□□ 0.34
PDF-201ENST00000288022 GAGE13Q4V321 117 aa17.2■□□□□ 0.34
PDF-201ENST00000288022 C14orf178Q8N769 122 aaPredicted RBP17.2■□□□□ 0.34
PDF-201ENST00000288022 XKRY2A2RUG3 117 aa17.19■□□□□ 0.34
PDF-201ENST00000288022 WFDC10BQ8IUB3 73 aa17.19■□□□□ 0.34
PDF-201ENST00000288022 ATP6V0E2Q8NHE4 81 aa17.19■□□□□ 0.34
PDF-201ENST00000288022 FAM210AQ96ND0 272 aa17.19■□□□□ 0.34
PDF-201ENST00000288022 FRAS1Q86XX4 4008 aa17.18■□□□□ 0.34
PDF-201ENST00000288022 TEX261Q6UWH6 196 aa17.18■□□□□ 0.34
PDF-201ENST00000288022 FER1L6-AS1Q8NA97 138 aa17.18■□□□□ 0.34
PDF-201ENST00000288022 OCC1Q8TAD7 63 aa17.18■□□□□ 0.34
PDF-201ENST00000288022 TIRAPP58753 221 aa17.17■□□□□ 0.34
PDF-201ENST00000288022 LY96Q9Y6Y9 160 aa17.17■□□□□ 0.34
PDF-201ENST00000288022 NUDT10Q8NFP7 164 aa17.16■□□□□ 0.34
PDF-201ENST00000288022 NUDT11Q96G61 164 aa17.16■□□□□ 0.34
PDF-201ENST00000288022 K7EN84 100 aa17.15■□□□□ 0.34
PDF-201ENST00000288022 IGLC6P0CF74 106 aa17.15■□□□□ 0.34
PDF-201ENST00000288022 ZNF56Q15929 161 aa17.15■□□□□ 0.34
PDF-201ENST00000288022 OR10J3Q5JRS4 329 aa17.15■□□□□ 0.34
PDF-201ENST00000288022 RNASE7Q9H1E1 156 aaKnown RBP17.15■□□□□ 0.34
PDF-201ENST00000288022 GTSF1LQ9H1H1 148 aa17.15■□□□□ 0.34
PDF-201ENST00000288022 Q9UF83 564 aa17.15■□□□□ 0.34
PDF-201ENST00000288022 TRAV9-2A0A087WT02 112 aa17.14■□□□□ 0.33
PDF-201ENST00000288022 TRAV8-6A0A0B4J262 113 aa17.14■□□□□ 0.33
PDF-201ENST00000288022 DNAH2Q9P225 4427 aa17.13■□□□□ 0.33
PDF-201ENST00000288022 SMIM17P0DL12 118 aa17.13■□□□□ 0.33
PDF-201ENST00000288022 EVI2AP22794 236 aa17.13■□□□□ 0.33
PDF-201ENST00000288022 AP1S3Q96PC3 154 aa17.13■□□□□ 0.33
PDF-201ENST00000288022 RPP21Q9H633 154 aaKnown RBP17.13■□□□□ 0.33
PDF-201ENST00000288022 A0A1B0GVY2 172 aa17.12■□□□□ 0.33
PDF-201ENST00000288022 LINC00694P0DN24 101 aa17.12■□□□□ 0.33
PDF-201ENST00000288022 LINC00315P59091 139 aa17.12■□□□□ 0.33
PDF-201ENST00000288022 LELP1Q5T871 98 aa17.12■□□□□ 0.33
PDF-201ENST00000288022 SMIM7Q9BQ49 75 aa17.12■□□□□ 0.33
PDF-201ENST00000288022 BIRC6Q9NR09 4857 aa17.11■□□□□ 0.33
PDF-201ENST00000288022 F5H697 171 aa17.11■□□□□ 0.33
PDF-201ENST00000288022 NDUFS6O75380 124 aaKnown RBP17.11■□□□□ 0.33
PDF-201ENST00000288022 SRP19P09132 144 aaKnown RBP17.11■□□□□ 0.33
PDF-201ENST00000288022 DNAH10OSP0CZ25 163 aa17.11■□□□□ 0.33
PDF-201ENST00000288022 RAB4BP61018 213 aa17.11■□□□□ 0.33
PDF-201ENST00000288022 CACNG7P62955 275 aa17.11■□□□□ 0.33
PDF-201ENST00000288022 TNP2Q05952 138 aa17.11■□□□□ 0.33
PDF-201ENST00000288022 IGHV3-38A0A0C4DH36 116 aa17.1■□□□□ 0.33
PDF-201ENST00000288022 F2Z2F3 143 aa17.1■□□□□ 0.33
PDF-201ENST00000288022 BTF3P20290 206 aaKnown RBP17.1■□□□□ 0.33
PDF-201ENST00000288022 LYZL1Q6UWQ5 148 aa17.1■□□□□ 0.33
PDF-201ENST00000288022 TRBV10-1A0A0K0K1A3 114 aa17.09■□□□□ 0.33
PDF-201ENST00000288022 ZNF727A8MUV8 499 aa17.09■□□□□ 0.33
PDF-201ENST00000288022 RPL36AP83881 106 aaKnown RBP17.09■□□□□ 0.33
PDF-201ENST00000288022 RPL36ALQ969Q0 106 aaKnown RBP17.09■□□□□ 0.33
PDF-201ENST00000288022 MSRB1Q9NZV6 116 aa17.08■□□□□ 0.32
PDF-201ENST00000288022 K7EP13 123 aa17.07■□□□□ 0.32
PDF-201ENST00000288022 GATCO43716 136 aaKnown RBP17.07■□□□□ 0.32
PDF-201ENST00000288022 MGPP08493 103 aa17.06■□□□□ 0.32
PDF-201ENST00000288022 ERVFC1-1P60608 527 aa17.06■□□□□ 0.32
PDF-201ENST00000288022 C10orf126Q8N4M7 172 aa17.06■□□□□ 0.32
PDF-201ENST00000288022 TRBV7-3A0A075B6L6 115 aa17.05■□□□□ 0.32
PDF-201ENST00000288022 A0A087WWC5 75 aa17.05■□□□□ 0.32
PDF-201ENST00000288022 FAM231DQ6ZW35 169 aa17.05■□□□□ 0.32
PDF-201ENST00000288022 TNFRSF18Q9Y5U5 241 aa17.05■□□□□ 0.32
PDF-201ENST00000288022 KIF25-AS1Q9Y6Z4 181 aa17.05■□□□□ 0.32
PDF-201ENST00000288022 DNAH17Q9UFH2 4485 aa17.05■□□□□ 0.32
PDF-201ENST00000288022 IGHV3-30P01768 117 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 IGHV3-33P01772 117 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 TRGC1P0CF51 173 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 IGHV3-30-3P0DP02 117 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 IGHV3-30-5P0DP03 117 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 CTRLP40313 264 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 PEA15Q15121 130 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 LINC01556Q5JQF7 62 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 LINC01551Q86U37 167 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 FAT2Q9NYQ8 4349 aa17.04■□□□□ 0.32
PDF-201ENST00000288022 NTF3P20783 257 aa17.03■□□□□ 0.32
PDF-201ENST00000288022 NFE4Q86UQ8 179 aa17.03■□□□□ 0.32
PDF-201ENST00000288022 NEXN-AS1Q8NBZ9 246 aa17.03■□□□□ 0.32
PDF-201ENST00000288022 UBE2D3P61077 147 aa17.02■□□□□ 0.32
PDF-201ENST00000288022 UBE2D2P62837 147 aa17.02■□□□□ 0.32
PDF-201ENST00000288022 OR10G8Q8NGN5 311 aa17.02■□□□□ 0.32
PDF-201ENST00000288022 HECTD4Q9Y4D8 3996 aa17.02■□□□□ 0.31
PDF-201ENST00000288022 A8MWL6 223 aa17.01■□□□□ 0.31
PDF-201ENST00000288022 SRSF3P84103 164 aaKnown RBP17.01■□□□□ 0.31
PDF-201ENST00000288022 TWIST1Q15672 202 aa17.01■□□□□ 0.31
PDF-201ENST00000288022 WDR73Q6P4I2 378 aa17.01■□□□□ 0.31
PDF-201ENST00000288022 FAM74A3Q4VXF1 159 aa17■□□□□ 0.31
PDF-201ENST00000288022 GTSF1Q8WW33 167 aa17■□□□□ 0.31
PDF-201ENST00000288022 C9JQL5 133 aa16.99■□□□□ 0.31
PDF-201ENST00000288022 TMEM241Q24JQ0 296 aa16.99■□□□□ 0.31
PDF-201ENST00000288022 Q6ZRN7 208 aaPredicted RBP16.99■□□□□ 0.31
PDF-201ENST00000288022 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.99■□□□□ 0.31
PDF-201ENST00000288022 DPH3P1Q9H4G8 78 aa16.99■□□□□ 0.31
PDF-201ENST00000288022 H7C1H1 209 aa16.98■□□□□ 0.31
PDF-201ENST00000288022 CT83Q5H943 113 aa16.98■□□□□ 0.31
PDF-201ENST00000288022 CNFNQ9BYD5 112 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms