RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 FAM74A4Q5TZK3 123 aa13.72□□□□□ -0.21
TIMP4-201ENST00000287814 SPANXN1Q5VSR9 72 aa13.72□□□□□ -0.21
TIMP4-201ENST00000287814 FAM231DQ6ZW35 169 aa13.72□□□□□ -0.21
TIMP4-201ENST00000287814 COMMD7Q86VX2 200 aa13.72□□□□□ -0.21
TIMP4-201ENST00000287814 Q9UF83 564 aa13.72□□□□□ -0.21
TIMP4-201ENST00000287814 ZNRF2Q8NHG8 242 aa13.71□□□□□ -0.21
TIMP4-201ENST00000287814 XKRY2A2RUG3 117 aa13.7□□□□□ -0.22
TIMP4-201ENST00000287814 TMEM241Q24JQ0 296 aa13.7□□□□□ -0.22
TIMP4-201ENST00000287814 FAM74A3Q4VXF1 159 aa13.7□□□□□ -0.22
TIMP4-201ENST00000287814 LYZL1Q6UWQ5 148 aa13.7□□□□□ -0.22
TIMP4-201ENST00000287814 MSRB1Q9NZV6 116 aa13.7□□□□□ -0.22
TIMP4-201ENST00000287814 DNAH6Q9C0G6 4158 aa13.7□□□□□ -0.22
TIMP4-201ENST00000287814 IGLV2-18A0A075B6J9 118 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
TIMP4-201ENST00000287814 ERVFC1-1P60608 527 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 C14orf178Q8N769 122 aaPredicted RBP13.69□□□□□ -0.22
TIMP4-201ENST00000287814 SRIP30626 198 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 RPL23P62829 140 aaKnown RBP13.69□□□□□ -0.22
TIMP4-201ENST00000287814 RHOHQ15669 191 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 LYPD5Q6UWN5 251 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 NEGR1Q7Z3B1 354 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 GTSF1Q8WW33 167 aa13.69□□□□□ -0.22
TIMP4-201ENST00000287814 RHODO00212 210 aa13.68□□□□□ -0.22
TIMP4-201ENST00000287814 FAM3BP58499 235 aaPredicted RBP13.68□□□□□ -0.22
TIMP4-201ENST00000287814 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
TIMP4-201ENST00000287814 A0A1W2PPQ1 181 aa13.67□□□□□ -0.22
TIMP4-201ENST00000287814 F2Z2F3 143 aa13.67□□□□□ -0.22
TIMP4-201ENST00000287814 M0R2N4 97 aa13.67□□□□□ -0.22
TIMP4-201ENST00000287814 SOHLH1Q5JUK2 328 aa13.67□□□□□ -0.22
TIMP4-201ENST00000287814 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
TIMP4-201ENST00000287814 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
TIMP4-201ENST00000287814 NAT8Q9UHE5 227 aa13.66□□□□□ -0.22
TIMP4-201ENST00000287814 MRPS16Q9Y3D3 137 aaKnown RBP13.66□□□□□ -0.22
TIMP4-201ENST00000287814 CTRLP40313 264 aa13.66□□□□□ -0.22
TIMP4-201ENST00000287814 OSTCQ9NRP0 149 aa13.66□□□□□ -0.22
TIMP4-201ENST00000287814 NTF3P20783 257 aa13.65□□□□□ -0.22
TIMP4-201ENST00000287814 LINC00315P59091 139 aa13.65□□□□□ -0.22
TIMP4-201ENST00000287814 CACNG7P62955 275 aa13.65□□□□□ -0.22
TIMP4-201ENST00000287814 UPK3BQ9BT76 320 aa13.65□□□□□ -0.22
TIMP4-201ENST00000287814 ADIRFQ15847 76 aa13.64□□□□□ -0.23
TIMP4-201ENST00000287814 Q9H8V8 135 aa13.64□□□□□ -0.23
TIMP4-201ENST00000287814 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 A8MWL6 223 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 GAGE1Q13065 139 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 GAGE4Q13068 117 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 GAGE5Q13069 117 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 CT83Q5H943 113 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 Q6ZR54 194 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 CNFNQ9BYD5 112 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 V9GYV3 84 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 WDR73Q6P4I2 378 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 AP1S3Q96PC3 154 aa13.63□□□□□ -0.23
TIMP4-201ENST00000287814 LINC00694P0DN24 101 aa13.62□□□□□ -0.23
TIMP4-201ENST00000287814 EVI2AP22794 236 aa13.62□□□□□ -0.23
TIMP4-201ENST00000287814 FOXA3P55318 350 aaPredicted RBP13.62□□□□□ -0.23
TIMP4-201ENST00000287814 PGLYRP4Q96LB8 373 aa13.62□□□□□ -0.23
TIMP4-201ENST00000287814 RAB4BP61018 213 aa13.61□□□□□ -0.23
TIMP4-201ENST00000287814 ZNF56Q15929 161 aa13.61□□□□□ -0.23
TIMP4-201ENST00000287814 SH2D6Q7Z4S9 175 aa13.61□□□□□ -0.23
TIMP4-201ENST00000287814 TSKUQ8WUA8 353 aa13.61□□□□□ -0.23
TIMP4-201ENST00000287814 DNAH2Q9P225 4427 aa13.6□□□□□ -0.23
TIMP4-201ENST00000287814 C15orf54Q8N8G6 183 aa13.6□□□□□ -0.23
TIMP4-201ENST00000287814 NBDYA0A0U1RRE5 68 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 TWIST1Q15672 202 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 OR10G8Q8NGN5 311 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 ATP6V0E2Q8NHE4 81 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 F5H697 171 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 SMIM17P0DL12 118 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 KRTAP1-5Q9BYS1 174 aa13.59□□□□□ -0.23
TIMP4-201ENST00000287814 HIGD1CA8MV81 97 aa13.58□□□□□ -0.24
TIMP4-201ENST00000287814 TIRAPP58753 221 aa13.58□□□□□ -0.24
TIMP4-201ENST00000287814 GFRA4Q9GZZ7 299 aa13.58□□□□□ -0.24
TIMP4-201ENST00000287814 DNAH10Q8IVF4 4471 aa13.58□□□□□ -0.24
TIMP4-201ENST00000287814 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
TIMP4-201ENST00000287814 TRGC1P0CF51 173 aa13.57□□□□□ -0.24
TIMP4-201ENST00000287814 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
TIMP4-201ENST00000287814 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
TIMP4-201ENST00000287814 SIVA1O15304 175 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 MGPP08493 103 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 S100A1P23297 94 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 GTSF1LQ9H1H1 148 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
TIMP4-201ENST00000287814 FRAS1Q86XX4 4008 aa13.55□□□□□ -0.24
TIMP4-201ENST00000287814 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
TIMP4-201ENST00000287814 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
TIMP4-201ENST00000287814 M0QY20 66 aa13.54□□□□□ -0.24
TIMP4-201ENST00000287814 UBE2D3P61077 147 aa13.54□□□□□ -0.24
TIMP4-201ENST00000287814 UBE2D2P62837 147 aa13.54□□□□□ -0.24
TIMP4-201ENST00000287814 RPL36AP83881 106 aaKnown RBP13.54□□□□□ -0.24
TIMP4-201ENST00000287814 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
TIMP4-201ENST00000287814 RPL36ALQ969Q0 106 aaKnown RBP13.54□□□□□ -0.24
TIMP4-201ENST00000287814 RTL8CO15255 209 aa13.53□□□□□ -0.24
TIMP4-201ENST00000287814 ADCYAP1P18509 176 aa13.53□□□□□ -0.24
TIMP4-201ENST00000287814 A0A1B0GUT8 65 aa13.53□□□□□ -0.24
TIMP4-201ENST00000287814 LELP1Q5T871 98 aa13.53□□□□□ -0.24
TIMP4-201ENST00000287814 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.25
TIMP4-201ENST00000287814 TMEM218A2RU14 115 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms