RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TAL2Q16559 108 aa14.25□□□□□ -0.13
PCDH1-201ENST00000287008 DAZ2Q13117 558 aaKnown RBP14.25□□□□□ -0.13
PCDH1-201ENST00000287008 DAZ4Q86SG3 579 aaKnown RBP14.25□□□□□ -0.13
PCDH1-201ENST00000287008 DAZ3Q9NR90 486 aaKnown RBP14.25□□□□□ -0.13
PCDH1-201ENST00000287008 TRBV12-3P01733 135 aa14.25□□□□□ -0.13
PCDH1-201ENST00000287008 RPL32P62910 135 aaKnown RBP14.25□□□□□ -0.13
PCDH1-201ENST00000287008 PCP4P48539 62 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 SUMO4Q6EEV6 95 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 AMTNQ6UX39 209 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 LINC00574Q9H8X3 128 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 GAGE2BQ13066 116 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 GAGE2EQ4V326 116 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 LYPD6BQ8NI32 183 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 GAGE2DQ9UEU5 116 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 OCIAD2Q56VL3 154 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 DENND4AQ7Z401 1863 aa14.24□□□□□ -0.13
PCDH1-201ENST00000287008 C10orf91Q5T1B1 145 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 TRAV13-2A0A0B4J235 113 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 POLR3KQ9Y2Y1 108 aaPredicted RBP14.23□□□□□ -0.13
PCDH1-201ENST00000287008 COL4A3Q01955 1670 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 IGLV10-54A0A075B6I4 117 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 Q6YL49 198 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 MSRB1Q9NZV6 116 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 KLK5Q9Y337 293 aaPredicted RBP14.23□□□□□ -0.13
PCDH1-201ENST00000287008 DEFB4AO15263 64 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 IGLV2-14P01704 120 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 GAGE2AQ6NT46 116 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 CAMK2N2Q96S95 79 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 HHLA3Q9XRX5 114 aa14.23□□□□□ -0.13
PCDH1-201ENST00000287008 F8W735 103 aaPredicted RBP14.22□□□□□ -0.13
PCDH1-201ENST00000287008 IGHV3-30P01768 117 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 IGHV3-33P01772 117 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 INAFM2P0DMQ5 153 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 IGHV3-30-3P0DP02 117 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 IGHV3-30-5P0DP03 117 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 HIST2H2BCQ6DN03 193 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 Q6ZWC4 215 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 RPL39LQ96EH5 51 aaKnown RBP14.22□□□□□ -0.13
PCDH1-201ENST00000287008 SOCS3O14543 225 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 TRBV20-1A0A075B6N2 111 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 NDUFA11Q86Y39 141 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 BOD1L2Q8IYS8 172 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 SIGMAR1Q99720 223 aa14.22□□□□□ -0.13
PCDH1-201ENST00000287008 DEFB1P60022 68 aa14.21□□□□□ -0.13
PCDH1-201ENST00000287008 A0A0J9YX75 114 aa14.21□□□□□ -0.13
PCDH1-201ENST00000287008 Q9H8V8 135 aa14.21□□□□□ -0.13
PCDH1-201ENST00000287008 ZNF503Q96F45 646 aa14.21□□□□□ -0.13
PCDH1-201ENST00000287008 PROP1O75360 226 aa14.21□□□□□ -0.14
PCDH1-201ENST00000287008 COX8AP10176 69 aa14.21□□□□□ -0.14
PCDH1-201ENST00000287008 IGLL1P15814 213 aa14.21□□□□□ -0.14
PCDH1-201ENST00000287008 ZNF747Q9BV97 191 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 DKK2Q9UBU2 259 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 TMEM131Q92545 1883 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 IGLC2P0DOY2 106 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 IGLC3P0DOY3 106 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 MRPL52Q86TS9 123 aaKnown RBP14.2□□□□□ -0.14
PCDH1-201ENST00000287008 TRBV7-3A0A075B6L6 115 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 IGF1P05019 195 aa14.2□□□□□ -0.14
PCDH1-201ENST00000287008 LINC01548A6NM66 108 aa14.19□□□□□ -0.14
PCDH1-201ENST00000287008 PRO1854Q9UHT4 67 aa14.19□□□□□ -0.14
PCDH1-201ENST00000287008 PCNX3Q9H6A9 2034 aa14.19□□□□□ -0.14
PCDH1-201ENST00000287008 KMT2EQ8IZD2 1858 aa14.19□□□□□ -0.14
PCDH1-201ENST00000287008 COX7A2LO14548 114 aa14.19□□□□□ -0.14
PCDH1-201ENST00000287008 FGF6P10767 208 aa14.19□□□□□ -0.14
PCDH1-201ENST00000287008 DEFB125Q8N687 156 aa14.18□□□□□ -0.14
PCDH1-201ENST00000287008 IL17DQ8TAD2 202 aa14.18□□□□□ -0.14
PCDH1-201ENST00000287008 TM2D2Q9BX73 214 aa14.18□□□□□ -0.14
PCDH1-201ENST00000287008 CCDC140Q96MF4 163 aa14.17□□□□□ -0.14
PCDH1-201ENST00000287008 PRO0255Q9UI72 69 aa14.17□□□□□ -0.14
PCDH1-201ENST00000287008 MAP6D1Q9H9H5 199 aa14.17□□□□□ -0.14
PCDH1-201ENST00000287008 HERV-K104P63124 156 aa14.17□□□□□ -0.14
PCDH1-201ENST00000287008 TMEM263Q8WUH6 116 aaKnown RBP14.17□□□□□ -0.14
PCDH1-201ENST00000287008 ZFP2Q6ZN57 461 aa14.16□□□□□ -0.14
PCDH1-201ENST00000287008 DLEU1O43261 78 aa14.16□□□□□ -0.14
PCDH1-201ENST00000287008 C11orf71Q6IPW1 123 aa14.16□□□□□ -0.14
PCDH1-201ENST00000287008 SHISA2Q6UWI4 295 aa14.15□□□□□ -0.14
PCDH1-201ENST00000287008 A0A0J9YXV3 536 aa14.15□□□□□ -0.14
PCDH1-201ENST00000287008 ANAPC13Q9BS18 74 aa14.15□□□□□ -0.14
PCDH1-201ENST00000287008 TRAV4A0A0B4J268 109 aa14.15□□□□□ -0.14
PCDH1-201ENST00000287008 MED14OSP0DP75 135 aa14.15□□□□□ -0.14
PCDH1-201ENST00000287008 RPL18AQ02543 176 aaKnown RBP14.15□□□□□ -0.14
PCDH1-201ENST00000287008 UBE2V1Q13404 147 aa14.15□□□□□ -0.14
PCDH1-201ENST00000287008 Q6ZSV7 163 aa14.14□□□□□ -0.15
PCDH1-201ENST00000287008 IGLL5B9A064 214 aa14.14□□□□□ -0.15
PCDH1-201ENST00000287008 OBSL1O75147 1896 aa14.14□□□□□ -0.15
PCDH1-201ENST00000287008 PKD1L2Q7Z442 2459 aa14.13□□□□□ -0.15
PCDH1-201ENST00000287008 UTF1Q5T230 341 aa14.13□□□□□ -0.15
PCDH1-201ENST00000287008 VSIG2Q96IQ7 327 aa14.13□□□□□ -0.15
PCDH1-201ENST00000287008 ETDCA0A1B0GVM5 59 aa14.12□□□□□ -0.15
PCDH1-201ENST00000287008 ZFAND6Q6FIF0 208 aa14.12□□□□□ -0.15
PCDH1-201ENST00000287008 UBL5Q9BZL1 73 aa14.12□□□□□ -0.15
PCDH1-201ENST00000287008 KLK12Q9UKR0 248 aa14.12□□□□□ -0.15
PCDH1-201ENST00000287008 EP400Q96L91 3159 aa14.12□□□□□ -0.15
PCDH1-201ENST00000287008 EBI3Q14213 229 aa14.11□□□□□ -0.15
PCDH1-201ENST00000287008 P0C879 139 aa14.11□□□□□ -0.15
PCDH1-201ENST00000287008 RBMY1FQ15415 496 aaKnown RBP14.11□□□□□ -0.15
PCDH1-201ENST00000287008 MDFICQ9P1T7 246 aa14.11□□□□□ -0.15
PCDH1-201ENST00000287008 COX11Q9Y6N1 276 aa14.11□□□□□ -0.15
PCDH1-201ENST00000287008 C11orf45Q8TAV5 145 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms