RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 GAGE7O76087 117 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 TRGV3P03979 118 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 GAGE4Q13068 117 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 BUB1B-PAK6H3BSN5 160 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 TOMM6Q96B49 74 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 Q96MF0 132 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
ERCC3-201ENST00000285398 NHLRC4P0CG21 123 aaPredicted RBP8.02□□□□□ -1.13
ERCC3-201ENST00000285398 NDUFV3P56181 108 aaKnown RBP8.02□□□□□ -1.13
ERCC3-201ENST00000285398 IGHG4P01861 327 aa8.02□□□□□ -1.13
ERCC3-201ENST00000285398 TTC32Q5I0X7 151 aa8.02□□□□□ -1.13
ERCC3-201ENST00000285398 KIR2DL4Q99706 377 aa8.02□□□□□ -1.13
ERCC3-201ENST00000285398 IGKV3D-20A0A0C4DH25 116 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 LINC01548A6NM66 108 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 BRD3OSQ6XYD6 125 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 KLK15Q9H2R5 256 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 S4R3C0 116 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 HIVEP1P15822 2718 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 RBAKDNA6NC62 111 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 F8WDY8 70 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 IFITM1P13164 125 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 IGFL4Q6B9Z1 124 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 KRTAP1-3Q8IUG1 177 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 DYNAPQ8N1N2 210 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 C10orf126Q8N4M7 172 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 SLC50A1Q9BRV3 221 aa8.01□□□□□ -1.13
ERCC3-201ENST00000285398 TEP1Q99973 2627 aaKnown RBP8□□□□□ -1.13
ERCC3-201ENST00000285398 TRAV8-2A0A0B4J237 113 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 AVPP01185 164 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 HLA-DMBP28068 263 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 ERCC8Q13216 396 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 SIRPDQ9H106 197 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 IGHV4-4A0A075B6R2 117 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 A0A096LNT2 108 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 SLC25A20O43772 301 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 PRTN3P24158 256 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 HERVK_113P61574 105 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 Q6Q795 121 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 BAALCQ8WXS3 180 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 AJUBAQ96IF1 538 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 SMAD5-AS1Q9Y6J3 95 aa8□□□□□ -1.13
ERCC3-201ENST00000285398 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
ERCC3-201ENST00000285398 RAX2Q96IS3 184 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 C21orf62Q9NYP8 219 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 NIPBLQ6KC79 2804 aaeCLIP7.99□□□□□ -1.13
ERCC3-201ENST00000285398 IGHV7-4-1A0A0J9YVY3 117 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 MSMBP08118 114 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 IGHV4-38-2P0DP08 117 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
ERCC3-201ENST00000285398 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
ERCC3-201ENST00000285398 PAPPA-AS1Q5QFB9 102 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 IGLV11-55A0A075B6I3 123 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 A0A0J9YY99 117 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 LY6LH3BQJ8 138 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 CFC1BP0CG36 223 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 CFC1P0CG37 223 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 RASL10AQ92737 203 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 FANCD2OSQ96PS1 177 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 C1orf43Q9BWL3 253 aa7.99□□□□□ -1.13
ERCC3-201ENST00000285398 CR1P17927 2039 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 M0R1W7 72 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 TIMM23O14925 209 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 C2orf66Q6UXQ4 117 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 NBR2O15453 112 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 SAA4P35542 130 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 BEX4Q9NWD9 120 aaPredicted RBP7.98□□□□□ -1.13
ERCC3-201ENST00000285398 C11orf21Q9P2W6 132 aa7.98□□□□□ -1.13
ERCC3-201ENST00000285398 TRAV4A0A0B4J268 109 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 CENPVL3A0A0U1RRI6 287 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 C9JAW5 83 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 IGHV3-30P01768 117 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 IGHV3-30-5P0DP03 117 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 PRAC2D3DTV9 90 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 ANXA2RQ3ZCQ2 193 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 DPM3Q9P2X0 92 aa7.97□□□□□ -1.13
ERCC3-201ENST00000285398 JMJD1CQ15652 2540 aa7.96□□□□□ -1.13
ERCC3-201ENST00000285398 B4DSR2 109 aa7.96□□□□□ -1.13
ERCC3-201ENST00000285398 WIPF1O43516 503 aa7.96□□□□□ -1.13
ERCC3-201ENST00000285398 SLC25A29Q8N8R3 303 aa7.96□□□□□ -1.13
ERCC3-201ENST00000285398 HIVEP2P31629 2446 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 ODF3BA8MYP8 253 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 DSCR9P59020 149 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 HES1Q14469 280 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 NPBQ8NG41 125 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.14
ERCC3-201ENST00000285398 MAST4O15021 2626 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms