RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IGHV4-28A0A0C4DH34 117 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 LOC105371267A0A1B0GV96 52 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 RAB4AP20338 218 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 LGALS9BQ3B8N2 356 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 MRPL51Q4U2R6 128 aaKnown RBP13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 RASL10AQ92737 203 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 EMP1P54849 157 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 Q0VG73 95 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 SPATA25Q9BR10 227 aa13.55□□□□□ -0.24
PDLIM3-202ENST00000284770 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
PDLIM3-202ENST00000284770 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
PDLIM3-202ENST00000284770 MRPL16Q9NX20 251 aaKnown RBP13.54□□□□□ -0.24
PDLIM3-202ENST00000284770 U3KQK5 164 aa13.54□□□□□ -0.24
PDLIM3-202ENST00000284770 TRGV1A0A0A0MS02 117 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 OR10J3Q5JRS4 329 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 C18orf32Q8TCD1 76 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 AP1S3Q96PC3 154 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 HOXA5P20719 270 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 DEFA6Q01524 100 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 Q6ZTI0 123 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 JPT2Q9H910 190 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 KIF25-AS1Q9Y6Z4 181 aa13.53□□□□□ -0.24
PDLIM3-202ENST00000284770 D6R8Y8 96 aa13.52□□□□□ -0.25
PDLIM3-202ENST00000284770 DEFB4AO15263 64 aa13.52□□□□□ -0.25
PDLIM3-202ENST00000284770 C14orf178Q8N769 122 aaPredicted RBP13.52□□□□□ -0.25
PDLIM3-202ENST00000284770 DPH3P1Q9H4G8 78 aa13.52□□□□□ -0.25
PDLIM3-202ENST00000284770 NACAE9PAV3 2078 aa13.51□□□□□ -0.25
PDLIM3-202ENST00000284770 LINC00310P59036 64 aa13.51□□□□□ -0.25
PDLIM3-202ENST00000284770 B9D2Q9BPU9 175 aa13.51□□□□□ -0.25
PDLIM3-202ENST00000284770 A8MWV9 139 aa13.5□□□□□ -0.25
PDLIM3-202ENST00000284770 LINC00315P59091 139 aa13.5□□□□□ -0.25
PDLIM3-202ENST00000284770 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
PDLIM3-202ENST00000284770 LYRM9A8MSI8 78 aa13.5□□□□□ -0.25
PDLIM3-202ENST00000284770 IQCJQ1A5X6 159 aa13.5□□□□□ -0.25
PDLIM3-202ENST00000284770 SMKR1H3BMG3 65 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 GAS8-AS1O95177 125 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 PPBPP02775 128 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 CRYGDP07320 174 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 SMIM17P0DL12 118 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 CKS2P33552 79 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 POM121L12Q8N7R1 296 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 SAMD10Q9BYL1 202 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
PDLIM3-202ENST00000284770 A0A087WWL8 130 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 GAGE12BA1L429 117 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 NUPR1O60356 82 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 GAGE7O76087 117 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 NCR2O95944 276 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 GAGE12FP0CL80 117 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 GAGE12GP0CL81 117 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 GAGE12IP0CL82 117 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 FAM222AQ5U5X8 452 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 CFAP126Q5VTH2 177 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 BAGE3Q86Y29 109 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 HIST3H2BBQ8N257 126 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 LINC00612Q8N6U2 182 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 ZMAT4Q9H898 229 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 SERF1AO75920 110 aa13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 C11orf68Q9H3H3 251 aaKnown RBP13.48□□□□□ -0.25
PDLIM3-202ENST00000284770 IFITM10A6NMD0 228 aa13.47□□□□□ -0.25
PDLIM3-202ENST00000284770 RS1O15537 224 aa13.47□□□□□ -0.25
PDLIM3-202ENST00000284770 FAM74A4Q5TZK3 123 aa13.47□□□□□ -0.25
PDLIM3-202ENST00000284770 TRGV2A0A075B6R0 118 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 TRAV26-2A0A0B4J265 109 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 NPYP01303 97 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 SPART-AS1P0CW21 52 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 ESDP10768 282 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 UFSP1Q6NVU6 142 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 MRAP2Q96G30 205 aa13.46□□□□□ -0.25
PDLIM3-202ENST00000284770 DEFB130BP0DP73 79 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 DEFB130AP0DP74 79 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 OR4C5Q8NGB2 326 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 URB1-AS1Q96HZ7 61 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 C18orf15Q96N68 181 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 LAMTOR2Q9Y2Q5 125 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 TRAV4A0A0B4J268 109 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 MGPP08493 103 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 NRACQ8N912 160 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 CELA1Q9UNI1 258 aa13.45□□□□□ -0.26
PDLIM3-202ENST00000284770 ZFP2Q6ZN57 461 aa13.44□□□□□ -0.26
PDLIM3-202ENST00000284770 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
PDLIM3-202ENST00000284770 TEX48A0A1B0GUV7 120 aa13.43□□□□□ -0.26
PDLIM3-202ENST00000284770 RHODO00212 210 aa13.43□□□□□ -0.26
PDLIM3-202ENST00000284770 TNFRSF6BO95407 300 aa13.43□□□□□ -0.26
PDLIM3-202ENST00000284770 ZNF479Q96JC4 524 aa13.43□□□□□ -0.26
PDLIM3-202ENST00000284770 NIT1Q86X76 327 aa13.43□□□□□ -0.26
PDLIM3-202ENST00000284770 MEGF8Q7Z7M0 2845 aa13.42□□□□□ -0.26
PDLIM3-202ENST00000284770 IGHV3-73A0A0B4J1V6 119 aa13.42□□□□□ -0.26
PDLIM3-202ENST00000284770 F5H697 171 aa13.42□□□□□ -0.26
PDLIM3-202ENST00000284770 CIDEAO60543 219 aa13.42□□□□□ -0.26
PDLIM3-202ENST00000284770 ZNF56Q15929 161 aa13.42□□□□□ -0.26
PDLIM3-202ENST00000284770 IGHV3-53P01767 116 aa13.41□□□□□ -0.26
PDLIM3-202ENST00000284770 NHLRC4P0CG21 123 aaPredicted RBP13.41□□□□□ -0.26
PDLIM3-202ENST00000284770 DAD1P61803 113 aa13.41□□□□□ -0.26
PDLIM3-202ENST00000284770 SUMO4Q6EEV6 95 aa13.41□□□□□ -0.26
PDLIM3-202ENST00000284770 HIST1H2BLQ99880 126 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms