RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 VSIG2Q96IQ7 327 aa10.66□□□□□ -0.7
NOTCH1-201ENST00000277541 HOXB4P17483 251 aaPredicted RBP10.66□□□□□ -0.7
NOTCH1-201ENST00000277541 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
NOTCH1-201ENST00000277541 GATA1P15976 413 aaPredicted RBP10.66□□□□□ -0.7
NOTCH1-201ENST00000277541 DIAPH2-AS1Q14236 149 aa10.65□□□□□ -0.7
NOTCH1-201ENST00000277541 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.7
NOTCH1-201ENST00000277541 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 NOP10Q9NPE3 64 aaKnown RBP10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 IGFL3Q6UXB1 125 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 C3orf56Q8N813 242 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 K7EQD1 137 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 ZNF524Q96C55 264 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 CHKB-CPT1BH3BT56 60 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 DEFB105AQ8NG35 78 aa10.64□□□□□ -0.71
NOTCH1-201ENST00000277541 TMEM256-PLSCR3K7ERE1 68 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 LHBP01229 141 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 MRPL23Q16540 153 aaKnown RBP10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 CACNA1AO00555 2505 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 FAM167A-AS1Q96KT0 104 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 KRTAP27-1Q3LI81 207 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 NPBQ8NG41 125 aa10.63□□□□□ -0.71
NOTCH1-201ENST00000277541 PRB1P04280 392 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 BRK1Q8WUW1 75 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 U3KQE9 123 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 ARTNQ5T4W7 220 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 MUC4Q99102 2169 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 NREPQ16612 68 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 CLEC2BQ92478 149 aa10.62□□□□□ -0.71
NOTCH1-201ENST00000277541 PDE6GP18545 87 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 C22orf46C9J442 243 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 I3L2K1 104 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 LRP4O75096 1905 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 HIST2H2BCQ6DN03 193 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 ELANEP08246 267 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
NOTCH1-201ENST00000277541 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 TCL1BO95988 128 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 LINC00643Q86TS7 51 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 TECTAO75443 2155 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 C9orf47Q6ZRZ4 202 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 C16orf74Q96GX8 76 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 UQCRQO14949 82 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 DAND5Q8N907 189 aa10.6□□□□□ -0.71
NOTCH1-201ENST00000277541 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 COX7A2LO14548 114 aa10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 RPL39P62891 51 aaKnown RBP10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 K7EIM0 57 aa10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 K7ENP7 123 aa10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 C11orf53Q8IXP5 236 aa10.59□□□□□ -0.71
NOTCH1-201ENST00000277541 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.71
NOTCH1-201ENST00000277541 CGB3P0DN86 165 aa10.58□□□□□ -0.71
NOTCH1-201ENST00000277541 COL5A1P20908 1838 aaPredicted RBP10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 UBE2BP63146 152 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 A0A0J9YXV3 536 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 RNF183Q96D59 192 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 BUB3O43684 328 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 CXCL5P42830 114 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 HIGD2BQ4VC39 106 aa10.58□□□□□ -0.72
NOTCH1-201ENST00000277541 IGKV1-17P01599 117 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 NDUFB1O75438 58 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 A0A096LPF7 62 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 IGHV4-28A0A0C4DH34 117 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 LTBP2Q14767 1821 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 C2orf70A6NJV1 201 aa10.57□□□□□ -0.72
NOTCH1-201ENST00000277541 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 SPANXB1Q9NS25 103 aaPredicted RBP10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 UPK3BQ9BT76 320 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 LECT2O14960 151 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 MIAQ16674 131 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 PROP1O75360 226 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 C5orf38Q86SI9 138 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 SVIPQ8NHG7 77 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 Q6ZQT7 251 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 ADAMTS20P59510 1910 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
NOTCH1-201ENST00000277541 MT-ATP8P03928 68 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 Q8N1Y9 231 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 ATP5EP2Q5VTU8 51 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 Q96MF0 132 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 IGLV2-14P01704 120 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 CGB7P0DN87 165 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 Q6ZSR3 168 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 TEX22C9J3V5 150 aa10.55□□□□□ -0.72
NOTCH1-201ENST00000277541 PATE2Q6UY27 113 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms