RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 IGHV3-33P01772 117 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 IGHV3-30-3P0DP02 117 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 IGHV3-30-5P0DP03 117 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 RAB5CP51148 216 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 FAM74A4Q5TZK3 123 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 EIF5AL1Q6IS14 154 aaKnown RBP10.8□□□□□ -0.68
USE1-201ENST00000263897 CDPF1Q6NVV7 123 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 A0A087WWL8 130 aa10.79□□□□□ -0.68
USE1-201ENST00000263897 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
USE1-201ENST00000263897 TCTE3Q8IZS6 198 aa10.79□□□□□ -0.68
USE1-201ENST00000263897 ZFP82Q8N141 532 aa10.79□□□□□ -0.68
USE1-201ENST00000263897 MAPKAPK5-AS1Q8N8E1 139 aa10.79□□□□□ -0.68
USE1-201ENST00000263897 MANBALQ9NQG1 85 aa10.79□□□□□ -0.68
USE1-201ENST00000263897 LRP1BQ9NZR2 4599 aa10.79□□□□□ -0.68
USE1-201ENST00000263897 CXCL1P09341 107 aa10.78□□□□□ -0.68
USE1-201ENST00000263897 RPL19P84098 196 aaKnown RBP10.78□□□□□ -0.68
USE1-201ENST00000263897 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
USE1-201ENST00000263897 A0A087WWC5 75 aa10.77□□□□□ -0.69
USE1-201ENST00000263897 RPL35P42766 123 aaKnown RBP10.77□□□□□ -0.69
USE1-201ENST00000263897 SULT1A2P50226 295 aa10.77□□□□□ -0.69
USE1-201ENST00000263897 SSBP4Q9BWG4 385 aaPredicted RBP10.77□□□□□ -0.69
USE1-201ENST00000263897 LRCOL1A6NCL2 159 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 TEX46H3BTG2 121 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 PSCAO43653 123 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 PRR27Q6MZM9 219 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 Q6ZNX1 250 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 Q8N1X5 172 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 C11orf52Q96A22 123 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 Q9HAA7 133 aa10.76□□□□□ -0.69
USE1-201ENST00000263897 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 SNAI2O43623 268 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 C1QBP02746 253 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 LAGE3Q14657 143 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 Q8N3U1 123 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 OR10AG1Q8NH19 301 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 HSPG2P98160 4391 aa10.75□□□□□ -0.69
USE1-201ENST00000263897 OR5AL1P0C617 328 aa10.74□□□□□ -0.69
USE1-201ENST00000263897 SLC51BQ86UW2 128 aa10.74□□□□□ -0.69
USE1-201ENST00000263897 RAB4BP61018 213 aa10.73□□□□□ -0.69
USE1-201ENST00000263897 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
USE1-201ENST00000263897 DAZ4Q86SG3 579 aaKnown RBP10.73□□□□□ -0.69
USE1-201ENST00000263897 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
USE1-201ENST00000263897 TM2D2Q9BX73 214 aa10.73□□□□□ -0.69
USE1-201ENST00000263897 DAZ3Q9NR90 486 aaKnown RBP10.73□□□□□ -0.69
USE1-201ENST00000263897 TRBV7-3A0A075B6L6 115 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 KRTAP10-1P60331 282 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 UBE2D3P61077 147 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 UBE2D2P62837 147 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
USE1-201ENST00000263897 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 OR10G8Q8NGN5 311 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 DNAH5Q8TE73 4624 aa10.72□□□□□ -0.69
USE1-201ENST00000263897 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
USE1-201ENST00000263897 RAB19A4D1S5 217 aa10.71□□□□□ -0.69
USE1-201ENST00000263897 PDE6DO43924 150 aa10.71□□□□□ -0.69
USE1-201ENST00000263897 GCSHP23434 173 aa10.71□□□□□ -0.69
USE1-201ENST00000263897 CENPWQ5EE01 88 aa10.71□□□□□ -0.69
USE1-201ENST00000263897 NIT1Q86X76 327 aa10.71□□□□□ -0.69
USE1-201ENST00000263897 IFNA1P01562 189 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 XGP55808 180 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 SSTP61278 116 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 ZNF56Q15929 161 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 TOR2AQ5JU69 321 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 NTN5Q8WTR8 489 aaPredicted RBP10.7□□□□□ -0.7
USE1-201ENST00000263897 DAZAP1Q96EP5 407 aaKnown RBP10.7□□□□□ -0.7
USE1-201ENST00000263897 MED9Q9NWA0 146 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 URGCP-MRPS24S4R325 110 aa10.7□□□□□ -0.7
USE1-201ENST00000263897 ABCA13Q86UQ4 5058 aa10.69□□□□□ -0.7
USE1-201ENST00000263897 C19orf71A6NCJ1 209 aa10.69□□□□□ -0.7
USE1-201ENST00000263897 GNG4P50150 75 aa10.69□□□□□ -0.7
USE1-201ENST00000263897 Q8N814 137 aa10.69□□□□□ -0.7
USE1-201ENST00000263897 SMIM12Q96EX1 92 aa10.69□□□□□ -0.7
USE1-201ENST00000263897 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
USE1-201ENST00000263897 IGLV5-52A0A0A0MRZ9 124 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 F5H697 171 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 IGLC6P0CF74 106 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 BCL2P10415 239 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 RPS20P60866 119 aaKnown RBP10.68□□□□□ -0.7
USE1-201ENST00000263897 NEXN-AS1Q8NBZ9 246 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 VAX2Q9UIW0 290 aa10.68□□□□□ -0.7
USE1-201ENST00000263897 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
USE1-201ENST00000263897 TRBV20OR9-2A0A075B6H5 130 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 GZMBP10144 247 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 TAGLN2P37802 199 aaKnown RBP10.67□□□□□ -0.7
USE1-201ENST00000263897 AKAP14Q86UN6 197 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 CHCHD7Q9BUK0 85 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 KLK12Q9UKR0 248 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
USE1-201ENST00000263897 A0A087WX48 190 aa10.66□□□□□ -0.7
USE1-201ENST00000263897 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
USE1-201ENST00000263897 RBFOX3A6NFN3 312 aa10.66□□□□□ -0.7
USE1-201ENST00000263897 SMIM17P0DL12 118 aa10.66□□□□□ -0.7
USE1-201ENST00000263897 FER1L6-AS1Q8NA97 138 aa10.66□□□□□ -0.7
USE1-201ENST00000263897 BIN3Q9NQY0 253 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms