RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLAQ13239 276 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
SDF4-201ENST00000263741 C11orf21Q9P2W6 132 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 HIGD1CA8MV81 97 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 A8MWL6 223 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 C16orf74Q96GX8 76 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 TRAV21A0A0B4J279 112 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 HSBP1O75506 76 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 HBBP68871 147 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 MAJINQ3KP22 176 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
SDF4-201ENST00000263741 DKK2Q9UBU2 259 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 STARD9Q9P2P6 4700 aa13.1□□□□□ -0.31
SDF4-201ENST00000263741 P01737 135 aa13.09□□□□□ -0.31
SDF4-201ENST00000263741 NTF3P20783 257 aa13.09□□□□□ -0.31
SDF4-201ENST00000263741 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
SDF4-201ENST00000263741 PMCHL1Q16048 86 aa13.09□□□□□ -0.31
SDF4-201ENST00000263741 ANXA2RQ3ZCQ2 193 aa13.09□□□□□ -0.31
SDF4-201ENST00000263741 SPATA45Q537H7 98 aa13.09□□□□□ -0.31
SDF4-201ENST00000263741 NOP10Q9NPE3 64 aaKnown RBP13.09□□□□□ -0.31
SDF4-201ENST00000263741 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 CRIP1P50238 77 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 TDRG1Q3Y452 100 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 FAM159AQ6UWV7 190 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 C11orf72Q8NBR9 251 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 GFRA4Q9GZZ7 299 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 UQCR10Q9UDW1 63 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 ZFP30Q9Y2G7 519 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 A0A1B0GXF2 115 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 C12orf74Q32Q52 190 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 Q6ZTC4 211 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 NIT1Q86X76 327 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 Q8N976 141 aa13.08□□□□□ -0.32
SDF4-201ENST00000263741 SPART-AS1P0CW21 52 aa13.07□□□□□ -0.32
SDF4-201ENST00000263741 CAMPP49913 170 aa13.07□□□□□ -0.32
SDF4-201ENST00000263741 LINC00467Q9BRT7 94 aa13.07□□□□□ -0.32
SDF4-201ENST00000263741 ALKBH7Q9BT30 221 aaPredicted RBP13.07□□□□□ -0.32
SDF4-201ENST00000263741 MLST8Q9BVC4 326 aa13.07□□□□□ -0.32
SDF4-201ENST00000263741 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
SDF4-201ENST00000263741 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
SDF4-201ENST00000263741 GNRH2O43555 120 aa13.06□□□□□ -0.32
SDF4-201ENST00000263741 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
SDF4-201ENST00000263741 SH2D1AO60880 128 aa13.06□□□□□ -0.32
SDF4-201ENST00000263741 DEFB130BP0DP73 79 aa13.06□□□□□ -0.32
SDF4-201ENST00000263741 DEFB130AP0DP74 79 aa13.06□□□□□ -0.32
SDF4-201ENST00000263741 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
SDF4-201ENST00000263741 TIMM8BQ9Y5J9 83 aaPredicted RBP13.06□□□□□ -0.32
SDF4-201ENST00000263741 C20orf202A1L168 122 aa13.05□□□□□ -0.32
SDF4-201ENST00000263741 CTRLP40313 264 aa13.05□□□□□ -0.32
SDF4-201ENST00000263741 FAM19A2Q8N3H0 131 aa13.05□□□□□ -0.32
SDF4-201ENST00000263741 MUC4Q99102 2169 aa13.05□□□□□ -0.32
SDF4-201ENST00000263741 OR2D3Q8NGH3 330 aa13.04□□□□□ -0.32
SDF4-201ENST00000263741 C19orf71A6NCJ1 209 aa13.04□□□□□ -0.32
SDF4-201ENST00000263741 IGKV3D-20A0A0C4DH25 116 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 DAD1P61803 113 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 ZNF415Q09FC8 603 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 COL5A1-AS1Q5SY13 56 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 Q6ZTI0 123 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 COX8CQ7Z4L0 72 aa13.03□□□□□ -0.32
SDF4-201ENST00000263741 PHLDA1Q8WV24 401 aaPredicted RBP13.03□□□□□ -0.32
SDF4-201ENST00000263741 SSBP4Q9BWG4 385 aaPredicted RBP13.03□□□□□ -0.32
SDF4-201ENST00000263741 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
SDF4-201ENST00000263741 TMSB15BA0A087X1C1 80 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 IGHV3-16A0A0C4DH30 117 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 GAGE12BA1L429 117 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 LYRM9A8MSI8 78 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 GAGE7O76087 117 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 ORM1P02763 201 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 GAGE12FP0CL80 117 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 GAGE12GP0CL81 117 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 GAGE12IP0CL82 117 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 HTN3P15516 51 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 BATFQ16520 125 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 CASC10Q5T4H9 136 aa13.02□□□□□ -0.33
SDF4-201ENST00000263741 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
SDF4-201ENST00000263741 MRPL16Q9NX20 251 aaKnown RBP13.02□□□□□ -0.33
SDF4-201ENST00000263741 NACAE9PAV3 2078 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 TRGV11A0A075B6L2 103 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 IGLC3P0DOY3 106 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 ZNF25P17030 456 aaPredicted RBP13.01□□□□□ -0.33
SDF4-201ENST00000263741 G0S2P27469 103 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 Q6ZN92 141 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 TRGV1A0A0A0MS02 117 aa13.01□□□□□ -0.33
SDF4-201ENST00000263741 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
SDF4-201ENST00000263741 TEX48A0A1B0GUV7 120 aa13□□□□□ -0.33
SDF4-201ENST00000263741 C3orf84H3BNL1 204 aa13□□□□□ -0.33
SDF4-201ENST00000263741 GAGE1Q13065 139 aa13□□□□□ -0.33
SDF4-201ENST00000263741 DAZ2Q13117 558 aaKnown RBP13□□□□□ -0.33
SDF4-201ENST00000263741 TRAV9-2A0A087WT02 112 aa12.99□□□□□ -0.33
SDF4-201ENST00000263741 GTSF1Q8WW33 167 aa12.99□□□□□ -0.33
SDF4-201ENST00000263741 TMEM70Q9BUB7 260 aa12.98□□□□□ -0.33
SDF4-201ENST00000263741 DEFB131BA0A096LNP1 70 aa12.98□□□□□ -0.33
SDF4-201ENST00000263741 A0A1B0GW15 77 aa12.98□□□□□ -0.33
SDF4-201ENST00000263741 DYNC2H1Q8NCM8 4307 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms