RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 TRAV9-2A0A087WT02 112 aa12.54□□□□□ -0.4
COPE-201ENST00000262812 CRYGDP07320 174 aa12.54□□□□□ -0.4
COPE-201ENST00000262812 OR10AG1Q8NH19 301 aa12.54□□□□□ -0.4
COPE-201ENST00000262812 RHODO00212 210 aa12.53□□□□□ -0.4
COPE-201ENST00000262812 MED14OSP0DP75 135 aa12.53□□□□□ -0.4
COPE-201ENST00000262812 GZMBP10144 247 aa12.53□□□□□ -0.4
COPE-201ENST00000262812 EVI2AP22794 236 aa12.53□□□□□ -0.4
COPE-201ENST00000262812 TIRAPP58753 221 aa12.53□□□□□ -0.4
COPE-201ENST00000262812 OR10J3Q5JRS4 329 aa12.53□□□□□ -0.4
COPE-201ENST00000262812 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
COPE-201ENST00000262812 CXCL1P09341 107 aa12.52□□□□□ -0.41
COPE-201ENST00000262812 TAGLN2P37802 199 aaKnown RBP12.52□□□□□ -0.41
COPE-201ENST00000262812 SPANXN1Q5VSR9 72 aa12.52□□□□□ -0.41
COPE-201ENST00000262812 OR2D3Q8NGH3 330 aa12.52□□□□□ -0.41
COPE-201ENST00000262812 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
COPE-201ENST00000262812 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
COPE-201ENST00000262812 DNAH11Q96DT5 4516 aa12.51□□□□□ -0.41
COPE-201ENST00000262812 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
COPE-201ENST00000262812 RBFOX3A6NFN3 312 aa12.51□□□□□ -0.41
COPE-201ENST00000262812 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
COPE-201ENST00000262812 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
COPE-201ENST00000262812 PKHD1P08F94 4074 aa12.51□□□□□ -0.41
COPE-201ENST00000262812 DYNC1H1Q14204 4646 aaKnown RBP12.5□□□□□ -0.41
COPE-201ENST00000262812 IGHV3-38A0A0C4DH36 116 aa12.5□□□□□ -0.41
COPE-201ENST00000262812 SNAI2O43623 268 aa12.5□□□□□ -0.41
COPE-201ENST00000262812 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
COPE-201ENST00000262812 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
COPE-201ENST00000262812 P01737 135 aa12.49□□□□□ -0.41
COPE-201ENST00000262812 OR5AL1P0C617 328 aa12.49□□□□□ -0.41
COPE-201ENST00000262812 LELP1Q5T871 98 aa12.49□□□□□ -0.41
COPE-201ENST00000262812 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
COPE-201ENST00000262812 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 CEBPGP53567 150 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
COPE-201ENST00000262812 MSRB1Q9NZV6 116 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 HERC2O95714 4834 aa12.48□□□□□ -0.41
COPE-201ENST00000262812 KIAA1109Q2LD37 5005 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 ZNF56Q15929 161 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 Q6ZRN7 208 aaPredicted RBP12.47□□□□□ -0.41
COPE-201ENST00000262812 FER1L6-AS1Q8NA97 138 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 LYPD6BQ8NI32 183 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 OCC1Q8TAD7 63 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 BIN3Q9NQY0 253 aa12.47□□□□□ -0.41
COPE-201ENST00000262812 F5H697 171 aa12.46□□□□□ -0.41
COPE-201ENST00000262812 TOR2AQ5JU69 321 aa12.46□□□□□ -0.41
COPE-201ENST00000262812 SPATA12Q7Z6I5 190 aa12.46□□□□□ -0.41
COPE-201ENST00000262812 NFE4Q86UQ8 179 aa12.46□□□□□ -0.41
COPE-201ENST00000262812 NUDT10Q8NFP7 164 aa12.46□□□□□ -0.41
COPE-201ENST00000262812 NUDT11Q96G61 164 aa12.46□□□□□ -0.41
COPE-201ENST00000262812 EIF5A2Q9GZV4 153 aaKnown RBP12.46□□□□□ -0.41
COPE-201ENST00000262812 C16orf90A8MZG2 172 aa12.45□□□□□ -0.42
COPE-201ENST00000262812 K7EP13 123 aa12.45□□□□□ -0.42
COPE-201ENST00000262812 RAB4BP61018 213 aa12.45□□□□□ -0.42
COPE-201ENST00000262812 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
COPE-201ENST00000262812 C10orf126Q8N4M7 172 aa12.45□□□□□ -0.42
COPE-201ENST00000262812 XKRY2A2RUG3 117 aa12.44□□□□□ -0.42
COPE-201ENST00000262812 K7EN84 100 aa12.44□□□□□ -0.42
COPE-201ENST00000262812 IGLC6P0CF74 106 aa12.44□□□□□ -0.42
COPE-201ENST00000262812 SMIM17P0DL12 118 aa12.44□□□□□ -0.42
COPE-201ENST00000262812 RPL36AP83881 106 aaKnown RBP12.44□□□□□ -0.42
COPE-201ENST00000262812 RPL36ALQ969Q0 106 aaKnown RBP12.44□□□□□ -0.42
COPE-201ENST00000262812 RNASE7Q9H1E1 156 aaKnown RBP12.44□□□□□ -0.42
COPE-201ENST00000262812 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
COPE-201ENST00000262812 TMEM250H0YL14 139 aa12.43□□□□□ -0.42
COPE-201ENST00000262812 LYZL1Q6UWQ5 148 aa12.43□□□□□ -0.42
COPE-201ENST00000262812 Q8N3U1 123 aa12.43□□□□□ -0.42
COPE-201ENST00000262812 TRBV7-3A0A075B6L6 115 aa12.42□□□□□ -0.42
COPE-201ENST00000262812 A0A087WWC5 75 aa12.42□□□□□ -0.42
COPE-201ENST00000262812 AP1S3Q96PC3 154 aa12.42□□□□□ -0.42
COPE-201ENST00000262812 Q9HAA7 133 aa12.42□□□□□ -0.42
COPE-201ENST00000262812 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
COPE-201ENST00000262812 MGPP08493 103 aa12.41□□□□□ -0.42
COPE-201ENST00000262812 KRTAP10-2P60368 255 aa12.41□□□□□ -0.42
COPE-201ENST00000262812 CACNG7P62955 275 aa12.41□□□□□ -0.42
COPE-201ENST00000262812 RPP21Q9H633 154 aaKnown RBP12.41□□□□□ -0.42
COPE-201ENST00000262812 IBA57-AS1B1ANH7 110 aa12.4□□□□□ -0.42
COPE-201ENST00000262812 F2Z2F3 143 aa12.4□□□□□ -0.42
COPE-201ENST00000262812 UBE2D3P61077 147 aa12.4□□□□□ -0.42
COPE-201ENST00000262812 UBE2D2P62837 147 aa12.4□□□□□ -0.42
COPE-201ENST00000262812 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
COPE-201ENST00000262812 FAM210AQ96ND0 272 aa12.4□□□□□ -0.42
COPE-201ENST00000262812 EREGO14944 169 aa12.39□□□□□ -0.43
COPE-201ENST00000262812 NTF3P20783 257 aa12.39□□□□□ -0.43
COPE-201ENST00000262812 FUSP35637 526 aaKnown RBP eCLIP12.39□□□□□ -0.43
COPE-201ENST00000262812 ERVFC1-1P60608 527 aa12.39□□□□□ -0.43
COPE-201ENST00000262812 PSCAO43653 123 aa12.38□□□□□ -0.43
COPE-201ENST00000262812 DAZ4Q86SG3 579 aaKnown RBP12.38□□□□□ -0.43
COPE-201ENST00000262812 OR10G8Q8NGN5 311 aa12.38□□□□□ -0.43
COPE-201ENST00000262812 DAZ3Q9NR90 486 aaKnown RBP12.38□□□□□ -0.43
COPE-201ENST00000262812 A0A087WTM6 91 aa12.37□□□□□ -0.43
COPE-201ENST00000262812 GATCO43716 136 aaKnown RBP12.37□□□□□ -0.43
COPE-201ENST00000262812 SRP19P09132 144 aaKnown RBP12.37□□□□□ -0.43
COPE-201ENST00000262812 TWIST1Q15672 202 aa12.37□□□□□ -0.43
COPE-201ENST00000262812 TEX261Q6UWH6 196 aa12.37□□□□□ -0.43
COPE-201ENST00000262812 SMIM7Q9BQ49 75 aa12.37□□□□□ -0.43
COPE-201ENST00000262812 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms