RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 LINC01619G3V211 115 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 CCL24O00175 119 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 RPS20P60866 119 aaKnown RBP6.77□□□□□ -1.33
CKAP2-201ENST00000258607 RNASE3P12724 160 aaKnown RBP6.77□□□□□ -1.33
CKAP2-201ENST00000258607 CDKN1BP46527 198 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 STHQ8IWL8 128 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 LINC00482Q8N8I6 264 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 AP1S3Q96PC3 154 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 KIR2DL5BA0A0G2JN68 375 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 KIR2DL5BA0A0G2JPC4 375 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 CD5LO43866 347 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 SCGB1D4Q6XE38 83 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 ADAMTSL5Q6ZMM2 481 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 KIR2DL5AQ8N109 375 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 OR9G4Q8NGQ1 327 aa6.77□□□□□ -1.33
CKAP2-201ENST00000258607 A0A096LNT2 108 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
CKAP2-201ENST00000258607 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 AZU1P20160 251 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 GATA3P23771 443 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
CKAP2-201ENST00000258607 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
CKAP2-201ENST00000258607 Q6AWC8 147 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 C9orf47Q6ZRZ4 202 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 SPATA3Q8NHX4 192 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
CKAP2-201ENST00000258607 TP53TG1Q9Y2A0 90 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 CHCHD1Q96BP2 118 aaKnown RBP6.76□□□□□ -1.33
CKAP2-201ENST00000258607 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
CKAP2-201ENST00000258607 KLF5Q13887 457 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-201ENST00000258607 LINC01559Q495D7 138 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 RASL11AQ6T310 242 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 C2orf66Q6UXQ4 117 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 CTRLP40313 264 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 LAGE3Q14657 143 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 RASL10AQ92737 203 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-201ENST00000258607 A0A0J9YX75 114 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 IGKV2-29A2NJV5 120 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-201ENST00000258607 DNLZQ5SXM8 178 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 DPH3P1Q9H4G8 78 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 CYSLTR1Q9Y271 337 aa6.75□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE7O76087 117 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 NUTF2P61970 127 aaKnown RBP6.74□□□□□ -1.33
CKAP2-201ENST00000258607 LINC01006Q8NI28 216 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 SMIM12Q96EX1 92 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 TENM3Q9P273 2699 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
CKAP2-201ENST00000258607 PRB2P02812 416 aaPredicted RBP6.74□□□□□ -1.33
CKAP2-201ENST00000258607 COL5A1-AS1Q5SY13 56 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 ZNF418Q8TF45 676 aaPredicted RBP6.74□□□□□ -1.33
CKAP2-201ENST00000258607 SPAG8Q99932 426 aaPredicted RBP6.74□□□□□ -1.33
CKAP2-201ENST00000258607 U3KQE9 123 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 IGHV1OR15-1A0A075B7D0 117 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 A8MZ25 164 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 H3BUT2 72 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 LY6G6DO95868 133 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 KRTAP1-3Q8IUG1 177 aa6.74□□□□□ -1.33
CKAP2-201ENST00000258607 NHP2Q9NX24 153 aaKnown RBP6.74□□□□□ -1.33
CKAP2-201ENST00000258607 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 DEFB125Q8N687 156 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 C20orf144Q9BQM9 153 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 C11orf68Q9H3H3 251 aaKnown RBP6.73□□□□□ -1.33
CKAP2-201ENST00000258607 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
CKAP2-201ENST00000258607 K7EQG2 157 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 SOCS3O14543 225 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 CIDEAO60543 219 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 APOMO95445 188 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 C19orf54Q5BKX5 351 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 CLPSL2Q6UWE3 100 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 KIR2DL4Q99706 377 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 ZNF580Q9UK33 172 aa6.73□□□□□ -1.33
CKAP2-201ENST00000258607 RBMY1BA6NDE4 496 aaKnown RBP6.72□□□□□ -1.33
CKAP2-201ENST00000258607 RBMY1EA6NEQ0 496 aaKnown RBP6.72□□□□□ -1.33
CKAP2-201ENST00000258607 ELANEP08246 267 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 RBMY1DP0C7P1 496 aaKnown RBP6.72□□□□□ -1.33
CKAP2-201ENST00000258607 AMMECR1LQ6DCA0 310 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 PSMG3-AS1Q96PY0 264 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 ESDP10768 282 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 DGAT2L7PQ6IED9 249 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE12JA6NER3 117 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 OR11H12B2RN74 326 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 J3QLI3 93 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 NDUFA7O95182 113 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 IGKCP01834 107 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 PRSS2P07478 247 aa6.72□□□□□ -1.33
CKAP2-201ENST00000258607 GAGE1Q13065 139 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms