RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 RNF144BQ7Z419 303 aa6.38□□□□□ -1.39
DSG3-201ENST00000257189 C2CD3Q4AC94 2353 aa6.38□□□□□ -1.39
DSG3-201ENST00000257189 IGHV4-28A0A0C4DH34 117 aa6.38□□□□□ -1.39
DSG3-201ENST00000257189 PRB4P10163 310 aaPredicted RBP6.38□□□□□ -1.39
DSG3-201ENST00000257189 FHL1Q13642 323 aa6.38□□□□□ -1.39
DSG3-201ENST00000257189 ABCA2Q9BZC7 2435 aa6.38□□□□□ -1.39
DSG3-201ENST00000257189 SIPA1L1O43166 1804 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 RALGAPA2Q2PPJ7 1873 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 BLCAPP62952 87 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 TRBV30A0A0K0K1B3 111 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 TIMM17BO60830 172 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 LINC00205P59089 165 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 LINC00173Q6ZV60 143 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 ZNF581Q9P0T4 197 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 CGB7P0DN87 165 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 ADORA2A-AS1P86434 159 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 KAAG1Q9UBP8 84 aa6.37□□□□□ -1.39
DSG3-201ENST00000257189 CGB3P0DN86 165 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 LYPD2Q6UXB3 125 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 A6NED7 52 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 CFHR3Q02985 330 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 COL4A6Q14031 1691 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 FRMPD3Q5JV73 1810 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 E7EQL1 145 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 LY6G6EA0A0G2JKS1 128 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 C2orf70A6NJV1 201 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 IGLV3-1P01715 115 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 RNASE13Q5GAN3 156 aaKnown RBP6.36□□□□□ -1.39
DSG3-201ENST00000257189 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 U3KQA8 63 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 SMIM9A6NGZ8 99 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 NRGNQ92686 78 aa6.36□□□□□ -1.39
DSG3-201ENST00000257189 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 TEX22C9J3V5 150 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 SMAD5-AS1Q9Y6J3 95 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 WI2-2373I1.2A0A1W2PRP0 233 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 IGKV4-1P06312 121 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 C5orf24Q7Z6I8 188 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 DOCK4Q8N1I0 1966 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 TANC1Q9C0D5 1861 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 GNRH2O43555 120 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 LOXP28300 417 aaPredicted RBP6.35□□□□□ -1.39
DSG3-201ENST00000257189 DAND5Q8N907 189 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 CHD5Q8TDI0 1954 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 PRB2P02812 416 aaPredicted RBP6.35□□□□□ -1.39
DSG3-201ENST00000257189 GRNP28799 593 aaKnown RBP6.35□□□□□ -1.39
DSG3-201ENST00000257189 RPL39LQ96EH5 51 aaKnown RBP6.35□□□□□ -1.39
DSG3-201ENST00000257189 SPRY4Q9C004 299 aa6.35□□□□□ -1.39
DSG3-201ENST00000257189 PLXNA3P51805 1871 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 WDR86Q86TI4 376 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 WFDC11Q8NEX6 87 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 RLFQ13129 1914 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 SNRNP200O75643 2136 aaKnown RBP6.34□□□□□ -1.39
DSG3-201ENST00000257189 LOXL1Q08397 574 aaPredicted RBP6.34□□□□□ -1.39
DSG3-201ENST00000257189 LRRK1Q38SD2 2015 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 FAM222AQ5U5X8 452 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 RNF138Q8WVD3 245 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 TICRRQ7Z2Z1 1910 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 GATA1P15976 413 aaPredicted RBP6.34□□□□□ -1.39
DSG3-201ENST00000257189 SDIM1Q6ZPB5 146 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 MIR7-3HGQ8N6C7 128 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 C20orf203Q8NBC4 194 aa6.34□□□□□ -1.39
DSG3-201ENST00000257189 PCNX2A6NKB5 2137 aa6.34□□□□□ -1.4
DSG3-201ENST00000257189 MTCL1Q9Y4B5 1905 aaKnown RBP6.34□□□□□ -1.4
DSG3-201ENST00000257189 TRBV7-3A0A075B6L6 115 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 H0Y9J4 135 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 COL8A2P25067 703 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 UFSP1Q6NVU6 142 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 KIR2DL5BQ8NHK3 375 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 IGHV3-30-3P0DP02 117 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 IGKV1OR2-108A0A075B7D4 117 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 C4orf48Q5BLP8 95 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 Q8NA96 180 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 TP73-AS1Q9UF72 201 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 DOCK6Q96HP0 2047 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 DOCK9Q9BZ29 2069 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 A0A1B0GXF2 115 aa6.33□□□□□ -1.4
DSG3-201ENST00000257189 KIF26BQ2KJY2 2108 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 H7C423 109 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 Q6JHZ5 121 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 B9D2Q9BPU9 175 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 PDCD11Q14690 1871 aaKnown RBP6.32□□□□□ -1.4
DSG3-201ENST00000257189 IGHV4-4A0A075B6R2 117 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 G3V318 75 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 VPREB1P12018 145 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
DSG3-201ENST00000257189 IGHV4-30-2A0A087WSY4 118 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 C19orf71A6NCJ1 209 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 NPBQ8NG41 125 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 PIKFYVEQ9Y2I7 2098 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 NCR3O14931 201 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 IGFL2Q6UWQ7 119 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 ENHOQ6UWT2 76 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 NFE4Q86UQ8 179 aa6.32□□□□□ -1.4
DSG3-201ENST00000257189 VPREB3Q9UKI3 123 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms