RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 RBAKDNA6NC62 111 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
SLC6A8-201ENST00000253122 HIVEP3Q5T1R4 2406 aa12.15□□□□□ -0.46
SLC6A8-201ENST00000253122 TRBV7-1A0A0A6YYK4 115 aa12.15□□□□□ -0.46
SLC6A8-201ENST00000253122 LY6DQ14210 128 aa12.15□□□□□ -0.46
SLC6A8-201ENST00000253122 RASL10AQ92737 203 aa12.15□□□□□ -0.46
SLC6A8-201ENST00000253122 JPT2Q9H910 190 aa12.15□□□□□ -0.46
SLC6A8-201ENST00000253122 CFC1BP0CG36 223 aa12.15□□□□□ -0.47
SLC6A8-201ENST00000253122 CFC1P0CG37 223 aa12.15□□□□□ -0.47
SLC6A8-201ENST00000253122 CD28P10747 220 aa12.15□□□□□ -0.47
SLC6A8-201ENST00000253122 MORN3Q6PF18 240 aaPredicted RBP12.15□□□□□ -0.47
SLC6A8-201ENST00000253122 MINOS1Q5TGZ0 78 aa12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 MINOS1-NBL1R4GNA1 71 aa12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 HIVEP2P31629 2446 aa12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 CENPEQ02224 2701 aa12.14□□□□□ -0.47
SLC6A8-201ENST00000253122 GAGE12JA6NER3 117 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 GAGE7O76087 117 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 GAGE12FP0CL80 117 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 GAGE12GP0CL81 117 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 GAGE12IP0CL82 117 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 GAGE4Q13068 117 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 IFITM1P13164 125 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 BRD3OSQ6XYD6 125 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 TRAV8-3A0A0A6YYJ7 113 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 RHPN1-AS1Q9BWJ2 59 aa12.13□□□□□ -0.47
SLC6A8-201ENST00000253122 OOSP1A8MZH6 123 aa12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 M0R2P5 195 aa12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 SMIM20Q8N5G0 67 aa12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 RNASE13Q5GAN3 156 aaKnown RBP12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 Q8N9W7 124 aa12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 LINC01548A6NM66 108 aa12.12□□□□□ -0.47
SLC6A8-201ENST00000253122 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
SLC6A8-201ENST00000253122 H3BMM0 161 aa12.11□□□□□ -0.47
SLC6A8-201ENST00000253122 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
SLC6A8-201ENST00000253122 MUSTN1Q8IVN3 82 aa12.11□□□□□ -0.47
SLC6A8-201ENST00000253122 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
SLC6A8-201ENST00000253122 TRAV12-2A0A075B6T6 113 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 RS1O15537 224 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 IGHV3OR16-12A0A075B7B8 117 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 OVOL3O00110 214 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 A0A0J9YY99 117 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 JMJD1CQ15652 2540 aa12.1□□□□□ -0.47
SLC6A8-201ENST00000253122 TNFRSF13BO14836 293 aaPredicted RBP12.09□□□□□ -0.47
SLC6A8-201ENST00000253122 C9orf47Q6ZRZ4 202 aa12.09□□□□□ -0.47
SLC6A8-201ENST00000253122 Q6ZS46 218 aa12.09□□□□□ -0.47
SLC6A8-201ENST00000253122 TIMM21Q9BVV7 248 aa12.09□□□□□ -0.47
SLC6A8-201ENST00000253122 F8W735 103 aaPredicted RBP12.09□□□□□ -0.47
SLC6A8-201ENST00000253122 ZNF625Q96I27 306 aaPredicted RBP12.09□□□□□ -0.47
SLC6A8-201ENST00000253122 IGLV2-18A0A075B6J9 118 aa12.08□□□□□ -0.47
SLC6A8-201ENST00000253122 A0A0J9YXV3 536 aa12.08□□□□□ -0.47
SLC6A8-201ENST00000253122 MEIG1Q5JSS6 88 aa12.08□□□□□ -0.47
SLC6A8-201ENST00000253122 KLK9Q9UKQ9 250 aa12.08□□□□□ -0.47
SLC6A8-201ENST00000253122 IGHG4P01861 327 aa12.08□□□□□ -0.48
SLC6A8-201ENST00000253122 CIRBPQ14011 172 aaKnown RBP12.08□□□□□ -0.48
SLC6A8-201ENST00000253122 PRR9Q5T870 116 aa12.08□□□□□ -0.48
SLC6A8-201ENST00000253122 SUMO4Q6EEV6 95 aa12.08□□□□□ -0.48
SLC6A8-201ENST00000253122 SNRPD3P62318 126 aaKnown RBP12.07□□□□□ -0.48
SLC6A8-201ENST00000253122 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
SLC6A8-201ENST00000253122 CCDC140Q96MF4 163 aa12.07□□□□□ -0.48
SLC6A8-201ENST00000253122 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
SLC6A8-201ENST00000253122 RNASE1P07998 156 aaKnown RBP12.06□□□□□ -0.48
SLC6A8-201ENST00000253122 GATA3P23771 443 aa12.06□□□□□ -0.48
SLC6A8-201ENST00000253122 CDIP1Q9H305 208 aa12.06□□□□□ -0.48
SLC6A8-201ENST00000253122 NPFFO15130 113 aa12.06□□□□□ -0.48
SLC6A8-201ENST00000253122 ZFAND3Q9H8U3 227 aa12.06□□□□□ -0.48
SLC6A8-201ENST00000253122 UNQ9165/PRO28630Q6UXU0 137 aa12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 TEX49A0A1B0GTD5 131 aa12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 MOB4Q9Y3A3 225 aa12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 SPINK13Q1W4C9 94 aa12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 Q8N1Y9 231 aa12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 MRPL53Q96EL3 112 aaKnown RBP12.05□□□□□ -0.48
SLC6A8-201ENST00000253122 IGHV1-69DA0A0B4J2H0 117 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 BPESC1Q9GZL8 116 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
SLC6A8-201ENST00000253122 ZFP36P26651 326 aaKnown RBP12.03□□□□□ -0.48
SLC6A8-201ENST00000253122 UBE2E1P51965 193 aa12.03□□□□□ -0.48
SLC6A8-201ENST00000253122 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
SLC6A8-201ENST00000253122 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
SLC6A8-201ENST00000253122 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
SLC6A8-201ENST00000253122 PRORYQ9H606 182 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms