RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 LELP1Q5T871 98 aa14.3□□□□□ -0.12
HCFC1R1-201ENST00000248089 AKAP14Q86UN6 197 aa14.3□□□□□ -0.12
HCFC1R1-201ENST00000248089 SLC51BQ86UW2 128 aa14.3□□□□□ -0.12
HCFC1R1-201ENST00000248089 MLST8Q9BVC4 326 aa14.3□□□□□ -0.12
HCFC1R1-201ENST00000248089 EREGO14944 169 aa14.29□□□□□ -0.12
HCFC1R1-201ENST00000248089 LINC01556Q5JQF7 62 aa14.29□□□□□ -0.12
HCFC1R1-201ENST00000248089 SFRP2Q96HF1 295 aa14.29□□□□□ -0.12
HCFC1R1-201ENST00000248089 Q9UF83 564 aa14.29□□□□□ -0.12
HCFC1R1-201ENST00000248089 IGHV3-30P01768 117 aa14.28□□□□□ -0.12
HCFC1R1-201ENST00000248089 IGHV3-33P01772 117 aa14.28□□□□□ -0.12
HCFC1R1-201ENST00000248089 IGHV3-30-3P0DP02 117 aa14.28□□□□□ -0.12
HCFC1R1-201ENST00000248089 IGHV3-30-5P0DP03 117 aa14.28□□□□□ -0.12
HCFC1R1-201ENST00000248089 C11orf52Q96A22 123 aa14.28□□□□□ -0.12
HCFC1R1-201ENST00000248089 LRP1BQ9NZR2 4599 aa14.28□□□□□ -0.12
HCFC1R1-201ENST00000248089 RYR1P21817 5038 aa14.27□□□□□ -0.12
HCFC1R1-201ENST00000248089 LINC00694P0DN24 101 aa14.27□□□□□ -0.13
HCFC1R1-201ENST00000248089 CENPWQ5EE01 88 aa14.27□□□□□ -0.13
HCFC1R1-201ENST00000248089 OR10AG1Q8NH19 301 aa14.27□□□□□ -0.13
HCFC1R1-201ENST00000248089 IFNA1P01562 189 aa14.26□□□□□ -0.13
HCFC1R1-201ENST00000248089 CXCL1P09341 107 aa14.25□□□□□ -0.13
HCFC1R1-201ENST00000248089 FUSP35637 526 aaKnown RBP eCLIP14.25□□□□□ -0.13
HCFC1R1-201ENST00000248089 MEF2BQ02080 365 aaPredicted RBP14.25□□□□□ -0.13
HCFC1R1-201ENST00000248089 Q9HAA7 133 aa14.25□□□□□ -0.13
HCFC1R1-201ENST00000248089 BOLA1Q9Y3E2 137 aa14.25□□□□□ -0.13
HCFC1R1-201ENST00000248089 MUC21A0A0G2JKD1 596 aa14.24□□□□□ -0.13
HCFC1R1-201ENST00000248089 MUC21A0A140T8X8 626 aa14.24□□□□□ -0.13
HCFC1R1-201ENST00000248089 DNAH5Q8TE73 4624 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 A0A087WTM6 91 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 RAB19A4D1S5 217 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 PSCAO43653 123 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 PDE6DO43924 150 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 CDK2AP2O75956 126 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 BCL2P10415 239 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 GNG4P50150 75 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 SSTP61278 116 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 SPANXN1Q5VSR9 72 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 C9orf62Q8N4C0 152 aa14.23□□□□□ -0.13
HCFC1R1-201ENST00000248089 IBA57-AS1B1ANH7 110 aa14.22□□□□□ -0.13
HCFC1R1-201ENST00000248089 ZNF56Q15929 161 aa14.22□□□□□ -0.13
HCFC1R1-201ENST00000248089 Q8N3U1 123 aa14.22□□□□□ -0.13
HCFC1R1-201ENST00000248089 SNAI2O43623 268 aa14.21□□□□□ -0.13
HCFC1R1-201ENST00000248089 KRTAP17-1Q9BYP8 105 aa14.21□□□□□ -0.13
HCFC1R1-201ENST00000248089 MED9Q9NWA0 146 aa14.21□□□□□ -0.13
HCFC1R1-201ENST00000248089 HSPG2P98160 4391 aa14.2□□□□□ -0.14
HCFC1R1-201ENST00000248089 A0A087WWC5 75 aa14.2□□□□□ -0.14
HCFC1R1-201ENST00000248089 OR5AL1P0C617 328 aa14.2□□□□□ -0.14
HCFC1R1-201ENST00000248089 DAZAP1Q96EP5 407 aaKnown RBP14.2□□□□□ -0.14
HCFC1R1-201ENST00000248089 TPPP3Q9BW30 176 aa14.2□□□□□ -0.14
HCFC1R1-201ENST00000248089 VAX2Q9UIW0 290 aa14.2□□□□□ -0.14
HCFC1R1-201ENST00000248089 IGLV2-8P01709 118 aa14.19□□□□□ -0.14
HCFC1R1-201ENST00000248089 GZMBP10144 247 aa14.19□□□□□ -0.14
HCFC1R1-201ENST00000248089 RPL36AP83881 106 aaKnown RBP14.19□□□□□ -0.14
HCFC1R1-201ENST00000248089 RPL36ALQ969Q0 106 aaKnown RBP14.19□□□□□ -0.14
HCFC1R1-201ENST00000248089 SSBP4Q9BWG4 385 aaPredicted RBP14.19□□□□□ -0.14
HCFC1R1-201ENST00000248089 PGPEP1Q9NXJ5 209 aa14.19□□□□□ -0.14
HCFC1R1-201ENST00000248089 TRBV10-1A0A0K0K1A3 114 aa14.18□□□□□ -0.14
HCFC1R1-201ENST00000248089 ALKAL2Q6UX46 152 aa14.18□□□□□ -0.14
HCFC1R1-201ENST00000248089 OR2D3Q8NGH3 330 aa14.18□□□□□ -0.14
HCFC1R1-201ENST00000248089 PCLOQ9Y6V0 5065 aa14.18□□□□□ -0.14
HCFC1R1-201ENST00000248089 APOBP04114 4563 aaKnown RBP14.18□□□□□ -0.14
HCFC1R1-201ENST00000248089 RAB4BP61018 213 aa14.17□□□□□ -0.14
HCFC1R1-201ENST00000248089 CDPF1Q6NVV7 123 aa14.17□□□□□ -0.14
HCFC1R1-201ENST00000248089 MAPKAPK5-AS1Q8N8E1 139 aa14.17□□□□□ -0.14
HCFC1R1-201ENST00000248089 SMIM12Q96EX1 92 aa14.17□□□□□ -0.14
HCFC1R1-201ENST00000248089 TRBV20OR9-2A0A075B6H5 130 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 TRBV7-3A0A075B6L6 115 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 RBFOX3A6NFN3 312 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 F5H697 171 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 LAGE3Q14657 143 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 DAZ4Q86SG3 579 aaKnown RBP14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 AP1S3Q96PC3 154 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 DAZ3Q9NR90 486 aaKnown RBP14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 URGCP-MRPS24S4R325 110 aa14.16□□□□□ -0.14
HCFC1R1-201ENST00000248089 C19orf71A6NCJ1 209 aa14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 P01737 135 aa14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 SMIM17P0DL12 118 aa14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 TAGLN2P37802 199 aaKnown RBP14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 RPS20P60866 119 aaKnown RBP14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 UBE2D3P61077 147 aa14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 UBE2D2P62837 147 aa14.15□□□□□ -0.14
HCFC1R1-201ENST00000248089 NEXN-AS1Q8NBZ9 246 aa14.14□□□□□ -0.15
HCFC1R1-201ENST00000248089 IGLC6P0CF74 106 aa14.13□□□□□ -0.15
HCFC1R1-201ENST00000248089 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
HCFC1R1-201ENST00000248089 XKRY2A2RUG3 117 aa14.12□□□□□ -0.15
HCFC1R1-201ENST00000248089 MGPP08493 103 aa14.12□□□□□ -0.15
HCFC1R1-201ENST00000248089 NKX2-5P52952 324 aaPredicted RBP14.12□□□□□ -0.15
HCFC1R1-201ENST00000248089 NIT1Q86X76 327 aa14.12□□□□□ -0.15
HCFC1R1-201ENST00000248089 OR10G8Q8NGN5 311 aa14.12□□□□□ -0.15
HCFC1R1-201ENST00000248089 KRTAP4-5Q9BYR2 181 aa14.12□□□□□ -0.15
HCFC1R1-201ENST00000248089 TRAV8-3A0A0A6YYJ7 113 aa14.11□□□□□ -0.15
HCFC1R1-201ENST00000248089 LRCOL1A6NCL2 159 aa14.11□□□□□ -0.15
HCFC1R1-201ENST00000248089 BLOC1S1P78537 153 aa14.11□□□□□ -0.15
HCFC1R1-201ENST00000248089 TOR2AQ5JU69 321 aa14.11□□□□□ -0.15
HCFC1R1-201ENST00000248089 KCNIP4Q6PIL6 250 aa14.11□□□□□ -0.15
HCFC1R1-201ENST00000248089 TM2D2Q9BX73 214 aa14.11□□□□□ -0.15
HCFC1R1-201ENST00000248089 A0A087WX48 190 aa14.1□□□□□ -0.15
HCFC1R1-201ENST00000248089 A0A1B0GVG6 124 aa14.1□□□□□ -0.15
HCFC1R1-201ENST00000248089 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.1□□□□□ -0.15
HCFC1R1-201ENST00000248089 CACNG7P62955 275 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms