RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 DOCK6Q96HP0 2047 aa10.76□□□□□ -0.69
TARDBP-201ENST00000240185 BPY2O14599 106 aa10.76□□□□□ -0.69
TARDBP-201ENST00000240185 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
TARDBP-201ENST00000240185 H3BUA1 57 aa10.75□□□□□ -0.69
TARDBP-201ENST00000240185 TNRC6AQ8NDV7 1962 aaKnown RBP10.75□□□□□ -0.69
TARDBP-201ENST00000240185 SCN10AQ9Y5Y9 1956 aa10.75□□□□□ -0.69
TARDBP-201ENST00000240185 CASP8AP2Q9UKL3 1982 aa10.75□□□□□ -0.69
TARDBP-201ENST00000240185 IGHV1-58A0A0C4DH39 117 aa10.75□□□□□ -0.69
TARDBP-201ENST00000240185 MALRD1Q5VYJ5 2156 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 IGKV4-1P06312 121 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-201ENST00000240185 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 NDUFA1O15239 70 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 DOCK3Q8IZD9 2030 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 C2orf70A6NJV1 201 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
TARDBP-201ENST00000240185 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
TARDBP-201ENST00000240185 A0A087WW49 117 aa10.73□□□□□ -0.69
TARDBP-201ENST00000240185 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
TARDBP-201ENST00000240185 RLFQ13129 1914 aa10.73□□□□□ -0.69
TARDBP-201ENST00000240185 IGLV3-1P01715 115 aa10.73□□□□□ -0.69
TARDBP-201ENST00000240185 TET1Q8NFU7 2136 aa10.73□□□□□ -0.69
TARDBP-201ENST00000240185 IGHV3-30P01768 117 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 IGHV3-33P01772 117 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 IGHV3-30-3P0DP02 117 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 IGHV3-30-5P0DP03 117 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 CXCL5P42830 114 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 PLXNA1Q9UIW2 1896 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 UBE2AP49459 152 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 WFDC11Q8NEX6 87 aa10.72□□□□□ -0.69
TARDBP-201ENST00000240185 I3L2K1 104 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 FAM167A-AS1Q96KT0 104 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 PRR30Q53SZ7 412 aaPredicted RBP10.71□□□□□ -0.69
TARDBP-201ENST00000240185 C10orf105Q8TEF2 133 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 ZNF524Q96C55 264 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 KAAG1Q9UBP8 84 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 PCNX1Q96RV3 2341 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 K7EIM0 57 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 CTRLP40313 264 aa10.71□□□□□ -0.69
TARDBP-201ENST00000240185 TRBV7-3A0A075B6L6 115 aa10.71□□□□□ -0.7
TARDBP-201ENST00000240185 MIAQ16674 131 aa10.71□□□□□ -0.7
TARDBP-201ENST00000240185 ZGRF1Q86YA3 2104 aa10.71□□□□□ -0.7
TARDBP-201ENST00000240185 USP17L23D6RBM5 183 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 IGLV1-44P01699 117 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 C16orf74Q96GX8 76 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 SPAG11BQ08648 103 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 LOXL1Q08397 574 aaPredicted RBP10.7□□□□□ -0.7
TARDBP-201ENST00000240185 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
TARDBP-201ENST00000240185 ENHOQ6UWT2 76 aa10.69□□□□□ -0.7
TARDBP-201ENST00000240185 RBX1P62877 108 aa10.69□□□□□ -0.7
TARDBP-201ENST00000240185 CTSGP08311 255 aa10.69□□□□□ -0.7
TARDBP-201ENST00000240185 COX7BP24311 80 aa10.69□□□□□ -0.7
TARDBP-201ENST00000240185 PROK2Q9HC23 129 aa10.69□□□□□ -0.7
TARDBP-201ENST00000240185 LCTP09848 1927 aa10.69□□□□□ -0.7
TARDBP-201ENST00000240185 K7ERS5 55 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 RALGAPA2Q2PPJ7 1873 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 NDUFA7O95182 113 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 DSCAML1Q8TD84 2053 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 ESM1Q9NQ30 184 aa10.68□□□□□ -0.7
TARDBP-201ENST00000240185 ATP5EP2Q5VTU8 51 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 SCXQ7RTU7 201 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 J3QLI3 93 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 C1orf195Q5TG92 126 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 IGLV11-55A0A075B6I3 123 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 AJUBAQ96IF1 538 aa10.67□□□□□ -0.7
TARDBP-201ENST00000240185 A0A0J9YXY3 114 aa10.66□□□□□ -0.7
TARDBP-201ENST00000240185 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
TARDBP-201ENST00000240185 Q96MF0 132 aa10.66□□□□□ -0.7
TARDBP-201ENST00000240185 BRCA1P38398 1863 aaKnown RBP10.66□□□□□ -0.7
TARDBP-201ENST00000240185 TM2D2Q9BX73 214 aa10.66□□□□□ -0.7
TARDBP-201ENST00000240185 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
TARDBP-201ENST00000240185 ZSWIM8A7E2V4 1837 aa10.66□□□□□ -0.7
TARDBP-201ENST00000240185 IGHV7-81A0A0B4J1V7 117 aa10.65□□□□□ -0.7
TARDBP-201ENST00000240185 CCL24O00175 119 aa10.65□□□□□ -0.7
TARDBP-201ENST00000240185 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
TARDBP-201ENST00000240185 LRRC37A2A6NM11 1700 aa10.65□□□□□ -0.7
TARDBP-201ENST00000240185 HOXB4P17483 251 aaPredicted RBP10.65□□□□□ -0.7
TARDBP-201ENST00000240185 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
TARDBP-201ENST00000240185 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.71
TARDBP-201ENST00000240185 C11orf53Q8IXP5 236 aa10.65□□□□□ -0.71
TARDBP-201ENST00000240185 MYLKQ15746 1914 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 IGHV4-59P01825 116 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 SLURP1P55000 103 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 C19orf71A6NCJ1 209 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 A6NED7 52 aa10.64□□□□□ -0.71
TARDBP-201ENST00000240185 SP5Q6BEB4 398 aaPredicted RBP10.64□□□□□ -0.71
TARDBP-201ENST00000240185 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
TARDBP-201ENST00000240185 TIMM17BO60830 172 aa10.63□□□□□ -0.71
TARDBP-201ENST00000240185 CCL18P55774 89 aa10.63□□□□□ -0.71
TARDBP-201ENST00000240185 SERP2Q8N6R1 65 aa10.63□□□□□ -0.71
TARDBP-201ENST00000240185 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms