RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SIRPDQ9H106 197 aa7.17□□□□□ -1.26
HLA-DOA-201ENST00000229829 RHODO00212 210 aa7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 PLNP26678 52 aa7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 ATP6V0E2Q8NHE4 81 aa7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 LOC107984640A0A0U1RRK4 108 aa7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 F8VRH5 84 aa7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 IGF1P05019 195 aa7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 SRSF1Q07955 248 aaKnown RBP eCLIP7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 FAM110DQ8TAY7 271 aaPredicted RBP7.16□□□□□ -1.26
HLA-DOA-201ENST00000229829 S100A4P26447 101 aaKnown RBP7.15□□□□□ -1.26
HLA-DOA-201ENST00000229829 SAA4P35542 130 aa7.15□□□□□ -1.26
HLA-DOA-201ENST00000229829 DEFB1P60022 68 aa7.15□□□□□ -1.26
HLA-DOA-201ENST00000229829 IGLV2-18A0A075B6J9 118 aa7.15□□□□□ -1.26
HLA-DOA-201ENST00000229829 MINOS1Q5TGZ0 78 aa7.15□□□□□ -1.26
HLA-DOA-201ENST00000229829 MINOS1-NBL1R4GNA1 71 aa7.15□□□□□ -1.26
HLA-DOA-201ENST00000229829 IGHV7-4-1A0A0J9YVY3 117 aa7.15□□□□□ -1.27
HLA-DOA-201ENST00000229829 RS1O15537 224 aa7.15□□□□□ -1.27
HLA-DOA-201ENST00000229829 TMEM219Q86XT9 240 aa7.15□□□□□ -1.27
HLA-DOA-201ENST00000229829 Q8N8P6 123 aa7.15□□□□□ -1.27
HLA-DOA-201ENST00000229829 NACAE9PAV3 2078 aa7.15□□□□□ -1.27
HLA-DOA-201ENST00000229829 SPG11Q96JI7 2443 aa7.15□□□□□ -1.27
HLA-DOA-201ENST00000229829 PRR9Q5T870 116 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 C9orf153Q5TBE3 101 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 Q8N1Y9 231 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 DUX3Q96PT4 197 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 VCX2Q9H322 139 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 ZMAT4Q9H898 229 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 ITPR1Q14643 2758 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 IGHV3OR16-10A0A075B7F0 116 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 TRAV12-3A0A0B4J271 114 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 OOSP1A8MZH6 123 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 CSMD2Q7Z408 3487 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 LINC01546A6NGU7 62 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 NDUFA11Q86Y39 141 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 KLK5Q9Y337 293 aaPredicted RBP7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 TNFRSF18Q9Y5U5 241 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 ABCA2Q9BZC7 2435 aa7.14□□□□□ -1.27
HLA-DOA-201ENST00000229829 IGKV3-7A0A075B6H7 116 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 Q6ZS46 218 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 NRACQ8N912 160 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 C2orf82Q6UX34 121 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 PRO1854Q9UHT4 67 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 ADARB2-AS1A8MUL3 147 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 SLC50A1Q9BRV3 221 aa7.13□□□□□ -1.27
HLA-DOA-201ENST00000229829 FAM236AA0A1B0GUQ0 79 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 FAM236BA0A1B0GV22 79 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 RBAKDNA6NC62 111 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 UBE2E1P51965 193 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 CENPVL3A0A0U1RRI6 287 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 F5H697 171 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 LINC00694P0DN24 101 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 C2orf66Q6UXQ4 117 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 OR10J6PQ8NGY7 276 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 METTL26Q96S19 204 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 BPESC1Q9GZL8 116 aa7.12□□□□□ -1.27
HLA-DOA-201ENST00000229829 TRBV12-3P01733 135 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 CD7P09564 240 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 PMVKQ15126 192 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 C14orf178Q8N769 122 aaPredicted RBP7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 CFC1P0CG37 223 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 H3BMM0 161 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 PIFOQ8TCI5 191 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 EEF1AKMT3Q96AZ1 226 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 UBE2WQ96B02 151 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 EDA2RQ9HAV5 297 aa7.11□□□□□ -1.27
HLA-DOA-201ENST00000229829 LMO4P61968 165 aa7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 ZNF256Q9Y2P7 627 aaPredicted RBP7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 SRD5A1P18405 259 aa7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 C5orf56Q8N8D9 126 aa7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 KLRB1Q12918 225 aa7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 U3KQE9 123 aa7.1□□□□□ -1.27
HLA-DOA-201ENST00000229829 TRGV11A0A075B6L2 103 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 TRAV8-3A0A0A6YYJ7 113 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 C11orf86A6NJI1 115 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 F6UB75 175 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 RPL13AP40429 203 aaKnown RBP7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 BRD3OSQ6XYD6 125 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 GPHB5Q86YW7 130 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 UTP20O75691 2785 aaKnown RBP7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 NPFFO15130 113 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 DUSP14O95147 198 aaKnown RBP7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 CSPG4Q6UVK1 2322 aa7.09□□□□□ -1.27
HLA-DOA-201ENST00000229829 TRBV7-1A0A0A6YYK4 115 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 ASIPP42127 132 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 UBE2D3P61077 147 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 UBE2D2P62837 147 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 KLK9Q2XQG4 91 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 LINC01620Q4KN68 170 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 RASL10AQ92737 203 aa7.08□□□□□ -1.28
HLA-DOA-201ENST00000229829 KLK9Q9UKQ9 250 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms