RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 RAI1Q7Z5J4 1906 aaPredicted RBP11.13□□□□□ -0.63
PRDM4-201ENST00000228437 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
PRDM4-201ENST00000228437 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
PRDM4-201ENST00000228437 MAP1AP78559 2803 aaPredicted RBP11.12□□□□□ -0.63
PRDM4-201ENST00000228437 Q6ZS92 163 aa11.12□□□□□ -0.63
PRDM4-201ENST00000228437 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
PRDM4-201ENST00000228437 IGHV7-81A0A0B4J1V7 117 aa11.12□□□□□ -0.63
PRDM4-201ENST00000228437 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
PRDM4-201ENST00000228437 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
PRDM4-201ENST00000228437 TOMM6Q96B49 74 aa11.12□□□□□ -0.63
PRDM4-201ENST00000228437 Q8N1Y9 231 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 NEXN-AS1Q8NBZ9 246 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 ZMAT4Q9H898 229 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 A0A0J9YY99 117 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 NDUFV3P56181 108 aaKnown RBP11.11□□□□□ -0.63
PRDM4-201ENST00000228437 C9orf139Q6ZV77 190 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 DUX5Q96PT3 197 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 PRO3102Q9H379 93 aa11.11□□□□□ -0.63
PRDM4-201ENST00000228437 SAA4P35542 130 aa11.1□□□□□ -0.63
PRDM4-201ENST00000228437 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
PRDM4-201ENST00000228437 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
PRDM4-201ENST00000228437 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
PRDM4-201ENST00000228437 TRAV12-1A0A0B4J245 112 aa11.1□□□□□ -0.63
PRDM4-201ENST00000228437 ID1P41134 155 aa11.1□□□□□ -0.63
PRDM4-201ENST00000228437 PRR9Q5T870 116 aa11.1□□□□□ -0.63
PRDM4-201ENST00000228437 OVOL3O00110 214 aa11.09□□□□□ -0.63
PRDM4-201ENST00000228437 CHCHD5Q9BSY4 110 aa11.09□□□□□ -0.63
PRDM4-201ENST00000228437 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
PRDM4-201ENST00000228437 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
PRDM4-201ENST00000228437 TNFRSF18Q9Y5U5 241 aa11.09□□□□□ -0.63
PRDM4-201ENST00000228437 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
PRDM4-201ENST00000228437 PRO0461Q9UI25 63 aa11.08□□□□□ -0.64
PRDM4-201ENST00000228437 USP9YO00507 2555 aaPredicted RBP11.08□□□□□ -0.64
PRDM4-201ENST00000228437 ZFHX4Q86UP3 3567 aa11.08□□□□□ -0.64
PRDM4-201ENST00000228437 OVOL1O14753 267 aa11.08□□□□□ -0.64
PRDM4-201ENST00000228437 MRPL23Q16540 153 aaKnown RBP11.08□□□□□ -0.64
PRDM4-201ENST00000228437 RNASE1P07998 156 aaKnown RBP11.08□□□□□ -0.64
PRDM4-201ENST00000228437 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
PRDM4-201ENST00000228437 IGHV3-38A0A0C4DH36 116 aa11.08□□□□□ -0.64
PRDM4-201ENST00000228437 IGHV7-4-1A0A0J9YVY3 117 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 CRLF1O75462 422 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 SUMO4Q6EEV6 95 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 CEMP1Q6PRD7 247 aaPredicted RBP11.07□□□□□ -0.64
PRDM4-201ENST00000228437 CITED1Q99966 193 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 EDA2RQ9HAV5 297 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 TRBV7-9A0A0J9YWB2 115 aa11.07□□□□□ -0.64
PRDM4-201ENST00000228437 FAM110DQ8TAY7 271 aaPredicted RBP11.07□□□□□ -0.64
PRDM4-201ENST00000228437 TOMM7Q9P0U1 55 aa11.06□□□□□ -0.64
PRDM4-201ENST00000228437 NDUFA12Q9UI09 145 aa11.06□□□□□ -0.64
PRDM4-201ENST00000228437 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 FHL3Q13643 280 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 CIRBPQ14011 172 aaKnown RBP11.05□□□□□ -0.64
PRDM4-201ENST00000228437 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 CCDC168Q8NDH2 2452 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 IGLV2-18A0A075B6J9 118 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 SVIPQ8NHG7 77 aa11.05□□□□□ -0.64
PRDM4-201ENST00000228437 FAM236AA0A1B0GUQ0 79 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 FAM236BA0A1B0GV22 79 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 A8MZ25 164 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 IGHG4P01861 327 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 TSPEAR-AS2P59090 65 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 IGHV3-16A0A0C4DH30 117 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 Q6ZSV7 163 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 Q8N9W7 124 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 C20orf173Q96LM9 149 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
PRDM4-201ENST00000228437 ATMQ13315 3056 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 GAGE2AQ6NT46 116 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 IGFL2Q6UWQ7 119 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
PRDM4-201ENST00000228437 NPFFO15130 113 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 UBE2E1P51965 193 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 SHISA2Q6UWI4 295 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 NPBQ8NG41 125 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
PRDM4-201ENST00000228437 USP9XQ93008 2570 aaPredicted RBP11.03□□□□□ -0.64
PRDM4-201ENST00000228437 TRBV7-1A0A0A6YYK4 115 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 SLC25A29Q8N8R3 303 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 TMEM141Q96I45 108 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 CCDC140Q96MF4 163 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
PRDM4-201ENST00000228437 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
PRDM4-201ENST00000228437 IGHV3-33P01772 117 aa11.01□□□□□ -0.65
PRDM4-201ENST00000228437 UBE2D1P51668 147 aa11.01□□□□□ -0.65
PRDM4-201ENST00000228437 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
PRDM4-201ENST00000228437 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
PRDM4-201ENST00000228437 M0R1W7 72 aa11□□□□□ -0.65
PRDM4-201ENST00000228437 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
PRDM4-201ENST00000228437 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms