RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SNAI2O43623 268 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 NXPH4O95158 308 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 CRYGDP07320 174 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 RAB14P61106 215 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 RHOHQ15669 191 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 ZFP2Q6ZN57 461 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 C14orf178Q8N769 122 aaPredicted RBP8.7□□□□□ -1.02
LSM5-201ENST00000223084 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 Q9UF83 564 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 P01737 135 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 OR5AL1P0C617 328 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 CLLU1Q5K131 121 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 NUDT10Q8NFP7 164 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 TPPP3Q9BW30 176 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
LSM5-201ENST00000223084 KRTAP1-5Q9BYS1 174 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 BIN3Q9NQY0 253 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 RYR1P21817 5038 aa8.69□□□□□ -1.02
LSM5-201ENST00000223084 SRP19P09132 144 aaKnown RBP8.68□□□□□ -1.02
LSM5-201ENST00000223084 C1orf134Q5TEV5 83 aa8.68□□□□□ -1.02
LSM5-201ENST00000223084 SPANXN1Q5VSR9 72 aa8.68□□□□□ -1.02
LSM5-201ENST00000223084 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
LSM5-201ENST00000223084 GAGE12JA6NER3 117 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 RHODO00212 210 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 SIVA1O15304 175 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 IGLC6P0CF74 106 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
LSM5-201ENST00000223084 RPS20P60866 119 aaKnown RBP8.67□□□□□ -1.02
LSM5-201ENST00000223084 GAGE1Q13065 139 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 GAGE4Q13068 117 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 GAGE5Q13069 117 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 GAGE13Q4V321 117 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
LSM5-201ENST00000223084 C9JQL5 133 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 SRSF3P84103 164 aaKnown RBP8.66□□□□□ -1.02
LSM5-201ENST00000223084 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 SH2D6Q7Z4S9 175 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 ATP6V0E2Q8NHE4 81 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 SMIM7Q9BQ49 75 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 RPP21Q9H633 154 aaKnown RBP8.66□□□□□ -1.02
LSM5-201ENST00000223084 MSRB1Q9NZV6 116 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 FAT2Q9NYQ8 4349 aa8.66□□□□□ -1.02
LSM5-201ENST00000223084 XKRY2A2RUG3 117 aa8.65□□□□□ -1.02
LSM5-201ENST00000223084 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.02
LSM5-201ENST00000223084 NDUFS6O75380 124 aaKnown RBP8.65□□□□□ -1.02
LSM5-201ENST00000223084 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
LSM5-201ENST00000223084 LYZL1Q6UWQ5 148 aa8.65□□□□□ -1.02
LSM5-201ENST00000223084 C6orf223Q8N319 242 aa8.65□□□□□ -1.02
LSM5-201ENST00000223084 HERC2O95714 4834 aa8.64□□□□□ -1.03
LSM5-201ENST00000223084 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
LSM5-201ENST00000223084 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
LSM5-201ENST00000223084 TIRAPP58753 221 aa8.64□□□□□ -1.03
LSM5-201ENST00000223084 ZNF56Q15929 161 aa8.64□□□□□ -1.03
LSM5-201ENST00000223084 SOHLH1Q5JUK2 328 aa8.64□□□□□ -1.03
LSM5-201ENST00000223084 A0A1W2PPQ1 181 aa8.63□□□□□ -1.03
LSM5-201ENST00000223084 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
LSM5-201ENST00000223084 CACNG7P62955 275 aa8.63□□□□□ -1.03
LSM5-201ENST00000223084 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
LSM5-201ENST00000223084 GTSF1LQ9H1H1 148 aa8.63□□□□□ -1.03
LSM5-201ENST00000223084 LY96Q9Y6Y9 160 aa8.63□□□□□ -1.03
LSM5-201ENST00000223084 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
LSM5-201ENST00000223084 F2Z2F3 143 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 F5H697 171 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 LINC00315P59091 139 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 RAB4BP61018 213 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 PEA15Q15121 130 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 OR10J3Q5JRS4 329 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 FAM231DQ6ZW35 169 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 AP1S3Q96PC3 154 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 SMDT1Q9H4I9 107 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 TNFRSF18Q9Y5U5 241 aa8.62□□□□□ -1.03
LSM5-201ENST00000223084 TRAV8-6A0A0B4J262 113 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 MGPP08493 103 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 SMIM17P0DL12 118 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 NTF3P20783 257 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 CTRLP40313 264 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 ERVFC1-1P60608 527 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 TNP2Q05952 138 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 LELP1Q5T871 98 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 NEXN-AS1Q8NBZ9 246 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
LSM5-201ENST00000223084 IGHV3-38A0A0C4DH36 116 aa8.6□□□□□ -1.03
LSM5-201ENST00000223084 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
LSM5-201ENST00000223084 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
LSM5-201ENST00000223084 EVI2AP22794 236 aa8.6□□□□□ -1.03
LSM5-201ENST00000223084 LINC00862A6NCI5 91 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 A8MWL6 223 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 UBE2D3P61077 147 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 UBE2D2P62837 147 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
LSM5-201ENST00000223084 TMEM241Q24JQ0 296 aa8.59□□□□□ -1.03
LSM5-201ENST00000223084 Q8N3U1 123 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms