RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 CRIP1P50238 77 aa9.66□□□□□ -0.86
RHOXF1-201ENST00000217999 NTN5Q8WTR8 489 aaPredicted RBP9.66□□□□□ -0.86
RHOXF1-201ENST00000217999 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
RHOXF1-201ENST00000217999 MANBALQ9NQG1 85 aa9.66□□□□□ -0.86
RHOXF1-201ENST00000217999 URGCP-MRPS24S4R325 110 aa9.66□□□□□ -0.86
RHOXF1-201ENST00000217999 CXCL1P09341 107 aa9.65□□□□□ -0.86
RHOXF1-201ENST00000217999 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
RHOXF1-201ENST00000217999 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
RHOXF1-201ENST00000217999 JPT2Q9H910 190 aa9.65□□□□□ -0.86
RHOXF1-201ENST00000217999 SCRT2Q9NQ03 307 aa9.65□□□□□ -0.86
RHOXF1-201ENST00000217999 A0A087WWL8 130 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 RAB5CP51148 216 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 KCNIP4Q6PIL6 250 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 Q6ZSN1 163 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 BAGE2Q86Y30 109 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 SAMD10Q9BYL1 202 aa9.64□□□□□ -0.87
RHOXF1-201ENST00000217999 TRAV8-3A0A0A6YYJ7 113 aa9.63□□□□□ -0.87
RHOXF1-201ENST00000217999 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
RHOXF1-201ENST00000217999 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
RHOXF1-201ENST00000217999 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.63□□□□□ -0.87
RHOXF1-201ENST00000217999 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
RHOXF1-201ENST00000217999 IGLV5-52A0A0A0MRZ9 124 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 GCSHP23434 173 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 ZNF56Q15929 161 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 RMI2Q96E14 147 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
RHOXF1-201ENST00000217999 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
RHOXF1-201ENST00000217999 IFNA1P01562 189 aa9.61□□□□□ -0.87
RHOXF1-201ENST00000217999 HSPG2P98160 4391 aa9.61□□□□□ -0.87
RHOXF1-201ENST00000217999 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 FUSP35637 526 aaKnown RBP eCLIP9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 RPL35P42766 123 aaKnown RBP9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 RAB4BP61018 213 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 RPL19P84098 196 aaKnown RBP9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 ELOBQ15370 118 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 SPANXN1Q5VSR9 72 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 Q8N814 137 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 CHCHD7Q9BUK0 85 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 MLST8Q9BVC4 326 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 KRTAP4-5Q9BYR2 181 aa9.6□□□□□ -0.87
RHOXF1-201ENST00000217999 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 A0A087WX48 190 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 EPM2AB3EWF7 344 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 OR5AL1P0C617 328 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 SMIM17P0DL12 118 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 OR10AG1Q8NH19 301 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 C11orf52Q96A22 123 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
RHOXF1-201ENST00000217999 SNAI2O43623 268 aa9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 PDE6DO43924 150 aa9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 PKIAP61925 76 aa9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 TCTE3Q8IZS6 198 aa9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 FRZBQ92765 325 aa9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 DAZAP1Q96EP5 407 aaKnown RBP9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
RHOXF1-201ENST00000217999 XKRY2A2RUG3 117 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 GNG4P50150 75 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 SULT1A2P50226 295 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 KRTAP10-1P60331 282 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 RPS20P60866 119 aaKnown RBP9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 UBE2D3P61077 147 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 UBE2D2P62837 147 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 MEF2BQ02080 365 aaPredicted RBP9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 NIT1Q86X76 327 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 OR10G8Q8NGN5 311 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 BIN3Q9NQY0 253 aa9.57□□□□□ -0.88
RHOXF1-201ENST00000217999 F5H697 171 aa9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 SLC51BQ86UW2 128 aa9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 Q8N3U1 123 aa9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 SSBP4Q9BWG4 385 aaPredicted RBP9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 Q9UF83 564 aa9.56□□□□□ -0.88
RHOXF1-201ENST00000217999 RBFOX3A6NFN3 312 aa9.55□□□□□ -0.88
RHOXF1-201ENST00000217999 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
RHOXF1-201ENST00000217999 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
RHOXF1-201ENST00000217999 DNAH5Q8TE73 4624 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 IGKV2D-24A0A075B6R9 120 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 H7C1H1 209 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 CRPP02741 224 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 C1QBP02746 253 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 BCL2P10415 239 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 CCL20P78556 96 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 Q0VG73 95 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 FER1L6-AS1Q8NA97 138 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 NEXN-AS1Q8NBZ9 246 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 KLK12Q9UKR0 248 aa9.54□□□□□ -0.88
RHOXF1-201ENST00000217999 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
RHOXF1-201ENST00000217999 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
RHOXF1-201ENST00000217999 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms