RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 RPL11P62913 178 aaKnown RBP4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 Q8N6K4 173 aa4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 TOMM6Q96B49 74 aa4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 C16orf92Q96LL3 132 aa4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 LINC00477Q96M19 166 aa4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 C2CD3Q4AC94 2353 aa4.4□□□□□ -1.71
CEACAM1-201ENST00000161559 J3QL48 77 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 CFC1BP0CG36 223 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 CFC1P0CG37 223 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 PRTN3P24158 256 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 ZFAND2AQ8N6M9 145 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 SS18L2Q9UHA2 77 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 TP53TG1Q9Y2A0 90 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 CRLF1O75462 422 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 ANKRD29Q8N6D5 301 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 HECTD1Q9ULT8 2610 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 USP9YO00507 2555 aaPredicted RBP4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 SETD2Q9BYW2 2564 aaPredicted RBP4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 IGKV3-20P01619 116 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 RNASE3P12724 160 aaKnown RBP4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 S100A4P26447 101 aaKnown RBP4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 UBE2D1P51668 147 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 NDUFA11Q86Y39 141 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 DLX4Q92988 240 aaPredicted RBP4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 RNF5Q99942 180 aa4.39□□□□□ -1.71
CEACAM1-201ENST00000161559 A0A0J9YY99 117 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 PRM2P04554 102 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 SAA4P35542 130 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 NPC2P61916 151 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 TMEM170BQ5T4T1 132 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 FAM74A4Q5TZK3 123 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 TIMD4Q96H15 378 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 ZNF48Q96MX3 618 aaPredicted RBP4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 BEX4Q9NWD9 120 aaPredicted RBP4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 TRBV20-1A0A075B6N2 111 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 OXLD1Q5BKU9 147 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 RNASE13Q5GAN3 156 aaKnown RBP4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 HELZ2Q9BYK8 2649 aaKnown RBP4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 A8MZ25 164 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 J3QR89 54 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 UBE2D3P61077 147 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 UBE2D2P62837 147 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 BRD3OSQ6XYD6 125 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 Q9UF83 564 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 ZNF256Q9Y2P7 627 aaPredicted RBP4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 ABCA12Q86UK0 2595 aa4.38□□□□□ -1.71
CEACAM1-201ENST00000161559 PRRC2AP48634 2157 aaKnown RBP4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 DOPEY1Q5JWR5 2465 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 TRAV12-2A0A075B6T6 113 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 SCGB1A1P11684 91 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 SRSF2Q01130 221 aaKnown RBP4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 AMELXQ99217 191 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 IGHV3-30P01768 117 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 IGHV3-30-5P0DP03 117 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 LINC00315P59091 139 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 TAL2Q16559 108 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 CEMP1Q6PRD7 247 aaPredicted RBP4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 C9orf47Q6ZRZ4 202 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 C3orf56Q8N813 242 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 BBC3Q96PG8 261 aaPredicted RBP4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 METTL26Q96S19 204 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 SLC50A1Q9BRV3 221 aa4.37□□□□□ -1.71
CEACAM1-201ENST00000161559 TLN2Q9Y4G6 2542 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 TRAV4A0A0B4J268 109 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 TEX49A0A1B0GTD5 131 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 A4D1N5 150 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 C9JAW5 83 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 F5H697 171 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 SCGB1C2P0DMR2 95 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 TCTEX1D4Q5JR98 221 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 FAM110DQ8TAY7 271 aaPredicted RBP4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 ITLN2Q8WWU7 325 aaPredicted RBP4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 MYO9AB2RTY4 2548 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 RBAKDNA6NC62 111 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 IGIPA6NJ69 53 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 B5MCH6 92 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 IGHV4-39P01824 125 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 NHLRC4P0CG21 123 aaPredicted RBP4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 ATP5J2P56134 94 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 LY6EQ16553 131 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 HIST2H2BDQ6DRA6 164 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 SUMO4Q6EEV6 95 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 DPH3P1Q9H4G8 78 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 JMJD1CQ15652 2540 aa4.36□□□□□ -1.71
CEACAM1-201ENST00000161559 IGHV3-73A0A0B4J1V6 119 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 TRAV12-3A0A0B4J271 114 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 P0DMU3 169 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 FAM231AP0DMU4 169 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 FAM231CP0DMU5 169 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 MDFICQ9P1T7 246 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 ASIPP42127 132 aa4.35□□□□□ -1.71
CEACAM1-201ENST00000161559 SIRPDQ9H106 197 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms