RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 CRLF1O75462 422 aa17.85■□□□□ 0.45
TARBP1-201ENST00000040877 RBMY1FQ15415 496 aaKnown RBP17.84■□□□□ 0.45
TARBP1-201ENST00000040877 HIVEP2P31629 2446 aa17.84■□□□□ 0.45
TARBP1-201ENST00000040877 FANCD2OSQ96PS1 177 aa17.84■□□□□ 0.45
TARBP1-201ENST00000040877 OBSL1O75147 1896 aa17.84■□□□□ 0.45
TARBP1-201ENST00000040877 Q9H8V8 135 aa17.84■□□□□ 0.45
TARBP1-201ENST00000040877 TMEM131Q92545 1883 aa17.83■□□□□ 0.45
TARBP1-201ENST00000040877 PLA2G5P39877 138 aa17.83■□□□□ 0.45
TARBP1-201ENST00000040877 ZFP2Q6ZN57 461 aa17.83■□□□□ 0.45
TARBP1-201ENST00000040877 CACNA1AO00555 2505 aa17.83■□□□□ 0.44
TARBP1-201ENST00000040877 NUPR1O60356 82 aa17.83■□□□□ 0.44
TARBP1-201ENST00000040877 GATA1P15976 413 aaPredicted RBP17.83■□□□□ 0.44
TARBP1-201ENST00000040877 PLA2G2EQ9NZK7 142 aa17.83■□□□□ 0.44
TARBP1-201ENST00000040877 Q6ZQT7 251 aa17.82■□□□□ 0.44
TARBP1-201ENST00000040877 Q8N1Y9 231 aa17.82■□□□□ 0.44
TARBP1-201ENST00000040877 RPL39LQ96EH5 51 aaKnown RBP17.82■□□□□ 0.44
TARBP1-201ENST00000040877 TDRG1Q3Y452 100 aa17.82■□□□□ 0.44
TARBP1-201ENST00000040877 ZNF106Q9H2Y7 1883 aaKnown RBP17.82■□□□□ 0.44
TARBP1-201ENST00000040877 RNASE8Q8TDE3 154 aaKnown RBP17.82■□□□□ 0.44
TARBP1-201ENST00000040877 PRAC2D3DTV9 90 aa17.81■□□□□ 0.44
TARBP1-201ENST00000040877 E7EUB6 86 aa17.81■□□□□ 0.44
TARBP1-201ENST00000040877 P0C879 139 aa17.81■□□□□ 0.44
TARBP1-201ENST00000040877 CTRLP40313 264 aa17.81■□□□□ 0.44
TARBP1-201ENST00000040877 ZNF503Q96F45 646 aa17.81■□□□□ 0.44
TARBP1-201ENST00000040877 DSCR8Q96T75 97 aa17.8■□□□□ 0.44
TARBP1-201ENST00000040877 FREM1Q5H8C1 2179 aa17.8■□□□□ 0.44
TARBP1-201ENST00000040877 C12orf74Q32Q52 190 aa17.8■□□□□ 0.44
TARBP1-201ENST00000040877 MRPL36Q9P0J6 103 aaKnown RBP17.79■□□□□ 0.44
TARBP1-201ENST00000040877 MSRB1Q9NZV6 116 aa17.79■□□□□ 0.44
TARBP1-201ENST00000040877 TRBV7-3A0A075B6L6 115 aa17.78■□□□□ 0.44
TARBP1-201ENST00000040877 IGHG4P01861 327 aa17.78■□□□□ 0.44
TARBP1-201ENST00000040877 C11orf1Q9H5F2 150 aa17.78■□□□□ 0.44
TARBP1-201ENST00000040877 COX7A2LO14548 114 aa17.77■□□□□ 0.44
TARBP1-201ENST00000040877 CFC1BP0CG36 223 aa17.77■□□□□ 0.44
TARBP1-201ENST00000040877 CFC1P0CG37 223 aa17.77■□□□□ 0.44
TARBP1-201ENST00000040877 UBE2BP63146 152 aa17.77■□□□□ 0.44
TARBP1-201ENST00000040877 CARD19Q96LW7 228 aa17.77■□□□□ 0.44
TARBP1-201ENST00000040877 A0A0J9YX75 114 aa17.77■□□□□ 0.43
TARBP1-201ENST00000040877 SPRY2O43597 315 aa17.77■□□□□ 0.43
TARBP1-201ENST00000040877 C5orf38Q86SI9 138 aa17.77■□□□□ 0.43
TARBP1-201ENST00000040877 CITED2Q99967 270 aaPredicted RBP17.77■□□□□ 0.43
TARBP1-201ENST00000040877 DNAJC9-AS1A6NH13 148 aa17.76■□□□□ 0.43
TARBP1-201ENST00000040877 Q9HAA7 133 aa17.76■□□□□ 0.43
TARBP1-201ENST00000040877 DENND4AQ7Z401 1863 aa17.76■□□□□ 0.43
TARBP1-201ENST00000040877 TMEM61Q8N0U2 210 aa17.76■□□□□ 0.43
TARBP1-201ENST00000040877 GTSF1Q8WW33 167 aa17.75■□□□□ 0.43
TARBP1-201ENST00000040877 CAMK2N2Q96S95 79 aa17.75■□□□□ 0.43
TARBP1-201ENST00000040877 TRAV12-1A0A0B4J245 112 aa17.75■□□□□ 0.43
TARBP1-201ENST00000040877 IGF1P05019 195 aa17.75■□□□□ 0.43
TARBP1-201ENST00000040877 SMAD5-AS1Q9Y6J3 95 aa17.75■□□□□ 0.43
TARBP1-201ENST00000040877 PCP2Q8IVA1 136 aa17.74■□□□□ 0.43
TARBP1-201ENST00000040877 HHLA3Q9XRX5 114 aa17.74■□□□□ 0.43
TARBP1-201ENST00000040877 TIMM17AQ99595 171 aa17.74■□□□□ 0.43
TARBP1-201ENST00000040877 UNQ9165/PRO28630Q6UXU0 137 aa17.73■□□□□ 0.43
TARBP1-201ENST00000040877 NCOA6Q14686 2063 aaPredicted RBP17.73■□□□□ 0.43
TARBP1-201ENST00000040877 OTOGLQ3ZCN5 2332 aa17.73■□□□□ 0.43
TARBP1-201ENST00000040877 TMEM263Q8WUH6 116 aaKnown RBP17.73■□□□□ 0.43
TARBP1-201ENST00000040877 A0A0J9YXV3 536 aa17.72■□□□□ 0.43
TARBP1-201ENST00000040877 C19orf84I3L1E1 186 aa17.72■□□□□ 0.43
TARBP1-201ENST00000040877 B5MCH6 92 aa17.72■□□□□ 0.43
TARBP1-201ENST00000040877 IGKV1D-37A0A075B6S9 117 aa17.71■□□□□ 0.43
TARBP1-201ENST00000040877 TRAV4A0A0B4J268 109 aa17.71■□□□□ 0.43
TARBP1-201ENST00000040877 DYSFO75923 2080 aa17.71■□□□□ 0.43
TARBP1-201ENST00000040877 HAMPP81172 84 aa17.71■□□□□ 0.42
TARBP1-201ENST00000040877 Q6YL49 198 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 NTN5Q8WTR8 489 aaPredicted RBP17.7■□□□□ 0.42
TARBP1-201ENST00000040877 CCDC140Q96MF4 163 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 ODF3Q96PU9 254 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 TRBV10-1A0A0K0K1A3 114 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 PROP1O75360 226 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 NDUFA11Q86Y39 141 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 LGALS9O00182 355 aa17.7■□□□□ 0.42
TARBP1-201ENST00000040877 C15orf53Q8NAA6 179 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 C19orf71A6NCJ1 209 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 TRBV12-3P01733 135 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 CXCL5P42830 114 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 COX7B2Q8TF08 81 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 TOMM6Q96B49 74 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 SS18L2Q9UHA2 77 aa17.69■□□□□ 0.42
TARBP1-201ENST00000040877 H0YGX0 51 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 IGHV4-31P0DP07 118 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 DEFB135Q30KP9 77 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 ORMDL1Q9P0S3 153 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 CSPG4Q6UVK1 2322 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 TM2D2Q9BX73 214 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 EBI3Q14213 229 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 KIAA1549LQ6ZVL6 1849 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 MAP6D1Q9H9H5 199 aa17.68■□□□□ 0.42
TARBP1-201ENST00000040877 ETDCA0A1B0GVM5 59 aa17.67■□□□□ 0.42
TARBP1-201ENST00000040877 LINC00173Q6ZV60 143 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 PRO0255Q9UI72 69 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 TRACP01848 142 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 COL4A4P53420 1690 aaPredicted RBP17.66■□□□□ 0.42
TARBP1-201ENST00000040877 IGHV3-30P01768 117 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 IGHV3-33P01772 117 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 IGHV3-30-3P0DP02 117 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 IGHV3-30-5P0DP03 117 aa17.66■□□□□ 0.42
TARBP1-201ENST00000040877 SND1-IT1Q9HBX3 110 aa17.65■□□□□ 0.42
TARBP1-201ENST00000040877 HIST2H2BCQ6DN03 193 aa17.65■□□□□ 0.42
TARBP1-201ENST00000040877 IGLL5B9A064 214 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms