RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Scgb2a2J3KMP9 96 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rplp1P47955 114 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Fam222bQ6P539 562 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Wipf2Q6PEV3 440 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Msrb3Q8BU85 253 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Oraov1Q8CH62 137 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Cox19Q8K0C8 92 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1258Q8VGN6 311 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Prr30Q9D9B7 401 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Prss37Q9DAA4 237 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ly96Q9JHF9 160 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Igkv1-132A0A0B4J1H9 120 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 A0A286YCQ8 80 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm5741B2RVA4 72 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Zfp708F8VPP0 541 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 LfngO09010 378 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 NgfP01139 241 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ifna5P07349 189 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ly6c1P0CW02 131 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Col8a2P25318 699 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Sult1a1P52840 291 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Wfdc9Q3UW41 83 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm10309Q8C648 119 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Dmrtc2Q8CGW9 370 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 CrhQ8CIT0 187 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rhbdd2Q8VEK2 361 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr822Q8VFU1 312 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Mgst1Q91VS7 155 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 TirapQ99JY1 241 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Q9CQ90 155 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 1700008P02RikQ9DAJ8 175 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 MNCb-2875Q9DCB3 74 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Cxcr6Q9EQ16 351 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Pard6aQ9Z101 346 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 G6pc2Q9Z186 355 aa10.56□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm44596A0A0N4SVA0 210 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Mmp23O88676 391 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rpl19P84099 196 aaKnown RBP10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 StumQ0VBF8 141 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 OstcQ78XF5 149 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Fbxw26Q8BI58 466 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 C130073F10RikQ8C4L8 201 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 H2al3Q9D4U4 128 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Tnfrsf13cQ9D8D0 175 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Hdgfl3Q9JMG7 202 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rnf7Q9WTZ1 113 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ighv5-12-4A0A0A6YWG4 117 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm3045A0A1D5RMA1 209 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Zfp825A0A1Y7VK00 292 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Slc35d1A2AKQ0 355 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gata2O09100 480 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 B2mP01887 119 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Bmp5P49003 452 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Slc35b1P97858 322 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 1700009N14RikQ14AA6 216 aaKnown RBP10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Tff3Q62395 81 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 C330021F23RikQ8C7T0 141 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 EpcamQ99JW5 315 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Lurap1Q9D6I9 239 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ctnnbip1Q9JJN6 81 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 ArtnQ9Z0L2 224 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ly6g6dQ9Z1Q3 135 aa10.55□□□□□ -0.72
Nup88-203ENSMUST00000108531 Apc2Q9Z1K7 2274 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm6904E9PVF1 202 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 P04942 107 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gnb4P29387 340 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 CebpgP53568 150 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Pdlim4P70271 330 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 H2-DMb2Q31099 261 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Znf48Q3US17 591 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Wfdc8Q4KUS1 273 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ubald1Q6P3B2 176 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 COA4Q8BT51 87 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rln3Q8CHK2 141 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ifi27l2bQ8VC49 283 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1265Q8VEZ3 309 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1441Q8VFV3 318 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Prss28Q924N9 274 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Mapk1ip1Q9D7G9 263 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Cacna1aP97445 2368 aa10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 TprF6ZDS4 2431 aaKnown RBP10.54□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr218E9PWV2 313 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 G430095P16RikE9Q913 147 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ube2d2bQ6ZWY6 147 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ankrd55Q8BLD6 626 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Stpg2Q8C8J0 561 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1323Q8VF35 309 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Dscaml1Q4VA61 2053 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Trav7-4A0A075B6C1 113 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Gm36368A0A1D5RLK8 91 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Fcrl6A1YIY0 268 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1320A2AHM8 319 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Ccl1P10146 92 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Pmp2P24526 132 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Arl14eplQ3UKZ7 152 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Smim9Q3V0X1 137 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Trav7d-4Q5R1H9 113 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Rgs13Q8K443 158 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr1457Q8VFK3 317 aa10.53□□□□□ -0.72
Nup88-203ENSMUST00000108531 Olfr577Q8VH11 312 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms