RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Mrps36Q9CQX8 102 aa9.54□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Egr4Q9WUF2 478 aa9.54□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Gm44501A8R0T9 150 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Hoxa3P02831 443 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Olfr495Q8VF12 330 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 GmppaQ922H4 420 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Tnfrsf13cQ9D8D0 175 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 C2cd4aE9Q861 334 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Olfr251E9Q891 316 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Gm21244J3QK38 227 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Gm20825J3QM67 227 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 RhobP62746 196 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Ssty2Q149W4 227 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 1700009N14RikQ14AA6 216 aaKnown RBP9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Gm21394Q497R7 227 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Gm20854Q62461 227 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Olfr1323Q8VF35 309 aa9.53□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Tmem139E9PX92 214 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Wfdc8Q4KUS1 273 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Dlx1Q64317 255 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Olfr1474Q7TQQ8 314 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Olfr1178Q7TR20 323 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Slc25a48Q8BW66 306 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Vmn1r237Q8R296 289 aa9.52□□□□□ -0.88
Col9a1-202ENSMUST00000088349 Cmya5Q70KF4 3739 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Trav17A0A075B655 113 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm6904E9PVF1 202 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Lbhd2G3UW55 114 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Cd79bP15530 228 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 BsgP18572 389 aaKnown RBP9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gnb4P29387 340 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 UngP97931 306 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Tmem52bQ0VBF2 186 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm10842Q3U587 122 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm10775Q3V290 127 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Znf260Q62513 407 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 SriQ6P069 198 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1382Q7TQT3 311 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr25Q7TRD6 313 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Immp2lQ8BPT6 175 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ifi27l2bQ8VC49 283 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1258Q8VGN6 311 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Nicn1Q9CQM0 213 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Susd2Q9DBX3 820 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Kcnip2Q9JJ69 270 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mpdu1Q9R0Q9 247 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm28171A0A087WQ19 227 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Tm4sf19E9Q9H8 206 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm11027G8JL69 66 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Pcgf2P23798 342 aaKnown RBP9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Twist1P26687 206 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ypel3P61237 119 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Dynlrb1P62627 96 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Sumo1P63166 101 aaKnown RBP9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Znrd1Q791N7 123 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 H2afb1Q9CQ70 111 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ssbp2Q9CYZ8 361 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ssbp3Q9D032 388 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Vmn1r171Q9EPS6 316 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 PpbpQ9EQI5 113 aa9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mbnl1Q9JKP5 341 aaKnown RBP9.52□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1245A0A1L1SQJ6 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mtnd6P03925 172 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Lgals3P16110 264 aaKnown RBP9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Fbxl7Q5BJ29 491 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr153Q7TR48 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ceacam11Q9D0Z8 303 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 NbeaQ9EPN1 2936 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Igkv6-23A0A140T8N5 115 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Vmn1r149E9PWL6 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1116E9PXB8 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Vmn1r101E9Q365 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Vmn1r158G3UY92 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm4791J3QQ14 102 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Hoxb2P0C1T1 354 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Nanos1Q80WY3 267 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr822Q8VFU1 312 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1453Q8VFX0 307 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Cma2Q91VB1 246 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr959Q9EQ86 311 aa9.51□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Evi2aP20934 223 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Tctn2Q2MV57 700 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Arl14eplQ3UKZ7 152 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Cd200r3Q5UKY4 296 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Znf329Q6GQR8 522 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Pygo2Q80V76 405 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr262Q8VFV8 312 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mien1Q9CQ86 115 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 P2ry6Q9ERK9 328 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Arhgef17Q80U35 2057 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm4565A0A140LJ87 301 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mettl23A2AA28 253 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm14124A2AU83 715 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm6176J3QK59 301 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 RanP62827 216 aaKnown RBP9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Cib3Q0P523 160 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 MymxQ2Q5T5 84 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Q3U1D9 316 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm4567Q3UTA8 301 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Zfp420Q7TMN8 578 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms