RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Sipa1l3G3X9J0 1776 aa19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 P18525 117 aa19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Gm20854Q62461 227 aa19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Fam53bQ8BGR5 422 aa19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 SnrpcQ62241 159 aa19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Srsf7Q8BL97 267 aaKnown RBP19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Psmg3Q9CZH3 122 aa19.55■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Trav6-1A0A075B5Z8 112 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Ighv1-67A0A0G2JFN9 117 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Higd1bQ99JY6 98 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 NmbQ9CR53 121 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Olfr1337A2ACY8 315 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Rnase2O35291 155 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 ChodlQ9CXM0 273 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Olfr761Q7TRJ0 323 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Vmn1r235Q8R297 328 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 1700013G24RikQ9DAC6 286 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Mrps36Q9CQX8 102 aa19.54■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Prb1Q91X93 504 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Gm21616B6ZB74 166 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Olfr1350Q8VF34 308 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Rnf151Q9CQ29 239 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Ndufb8Q9D6J5 186 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Mixl1Q9WUI0 231 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Q8CF25 301 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Tspan2Q922J6 221 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Fam219bQ14DQ1 197 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Olfr810Q8VFH9 312 aa19.53■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 PpyP10601 100 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Rasl11aQ6IMB1 242 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Nkx2-8O70584 235 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Ccl2P10148 148 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Gm9945Q8BNZ3 91 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 Olfr322Q5NCC8 327 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 CenpvQ9CXS4 252 aa19.52■□□□□ 0.72
Sh3rf1-201ENSMUST00000034060 E030025P04RikA2A6V5 185 aa19.52■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Defa-rs7P50715 91 aa19.52■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Trav3-1Q5R1I8 114 aa19.52■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Olfr1419Q7TQS2 343 aa19.52■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Hcfc2Q9D968 241 aa19.52■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Hoxd11P23813 323 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Dlx6P70397 175 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Gm11232Q5SPI8 295 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Sfxn3Q91V61 321 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 GlmpQ9JHJ3 404 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 St6galnac6Q9JM95 333 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Ighv7-4A0A0A6YXL5 121 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Zfp983E9PUT0 460 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Mst1P26928 716 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 UngP97931 306 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Zfp72Q0VFY0 435 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Tmprss12Q3V0Q7 336 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Khdc1cQ4KL78 166 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Tmem50aQ9CXL1 157 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Slamf6Q9ET39 351 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Mpv17P19258 176 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 G6pc2Q9Z186 355 aa19.51■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Ubr3Q5U430 1889 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Fgf5P15656 264 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Mzt1Q8BUR9 78 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Marf1Q8BJ34 1730 aaKnown RBP19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Iglc3P01845 104 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Zpld1Q8BGZ8 415 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Gm10283Q8C3L5 117 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Snrpd3P62320 126 aaKnown RBP19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Pax8Q00288 457 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Klf2Q60843 354 aaKnown RBP19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 2200002J24RikQ9D807 110 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Efemp2Q9WVJ9 443 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Trav16nA0A075B634 117 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Gm21976J3QNN2 249 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Tmem171Q4KL18 322 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Rnf182Q8C432 247 aa19.5■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Umad1E0CX23 159 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 6430628N08RikA0A0U1RQ45 177 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Cd200r1lQ6XJV6 249 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Rtn4rl2Q7M6Z0 420 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Trdv4Q5R1A3 115 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Iah1Q9DB29 249 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Olfr779E9PUS9 130 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Iqcf6G3UWF2 157 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Spink2Q8BMY7 86 aa19.49■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 NrtnP97463 195 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Cd96Q3U0X8 602 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Il12rb1Q60837 738 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Atp5g2P56383 146 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 GalmQ8K157 342 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 4931422A03RikA2BHN9 113 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Pcp4P63054 62 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Tmem241Q3UME2 297 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Prss46Q5M8S2 314 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 4930583I09RikQ9D2E3 102 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 1700031F05RikB1AX30 191 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Olfr1367Q8VFG2 316 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Klk10Q99M20 278 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 SvilQ8K4L3 2170 aa19.48■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 D930048N14RikA2AA67 225 aa19.47■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Vgll4Q80V24 287 aa19.47■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 Q8BTC1 67 aa19.47■□□□□ 0.71
Sh3rf1-201ENSMUST00000034060 EppinQ9DA01 134 aa19.47■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 215.8 ms