RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Vmn1r167G3UW71 315 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Rnase2bO35292 155 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Zfp36l2P23949 484 aaKnown RBP9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Upk2P38575 184 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Pld4Q8BG07 503 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Tmem70Q921N7 253 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 SrfQ9JM73 504 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Ly6g6dQ9Z1Q3 135 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Myo15bI7HPW8 3033 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Cacna1aP97445 2368 aa9.6□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Col6a6Q8C6K9 2265 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Vps13cQ8BX70 3748 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm29049A0A087WSM5 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm21118J3QPK8 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Zfp36P22893 319 aaKnown RBP9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Slc25a5P51881 298 aaKnown RBP9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20909Q5FWB5 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20852Q5M8R5 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20917Q62457 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20809Q62458 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20865Q62460 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20738Q810R8 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Msrb3Q8BU85 253 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Olfr498Q8VEW2 330 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gkn3Q9D0T7 191 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm20806Q9D9T3 227 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 P2ry6Q9ERK9 328 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Cml1Q9JIZ0 222 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 RelnQ60841 3461 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Trbv29A0A0G2LB96 114 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Olfr284A0A0U1RP76 321 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Olfr1024A2ASU7 327 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Zfp456B2RUK9 458 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Zfp688E9Q5M9 274 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Colca2F8VPY8 239 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm26602M0QWA4 95 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm10881P01642 115 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Bmpr1bP36898 502 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 AesP63002 197 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Crip3Q6Q6R3 243 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gpr6Q6YNI2 363 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 BC048562Q80ZQ7 204 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Mob3aQ8BSU7 217 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 EogtQ8BYW9 527 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Rab40cQ8VHQ4 281 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Borcs7Q9CRC6 105 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Tmem126aQ9D8Y1 196 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm21913J3KML9 361 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Gm21776J3QPJ5 361 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Guca2aP33680 116 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Neil2Q6R2P8 329 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Il22ra2Q80XF5 230 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Olfr1370Q8VFG4 316 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Sval2Q99N75 144 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Mrpl51Q9CPY1 128 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 NmuQ9QXK8 174 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Prok2Q9QXU7 128 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 CnmdQ9Z1F6 334 aa9.59□□□□□ -0.87
Sdc1-201ENSMUST00000020911 Esp23A8R0V5 104 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Smim20D3Z7Q2 69 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Smim13E9Q942 88 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 CrygsO35486 178 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Cr2P19070 1025 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Tmem88bQ3TYP4 173 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm13757Q7TR17 305 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Nmes1Q810Q5 83 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Mgst1Q91VS7 155 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Med13Q5SWW4 2171 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 AcacaQ5SWU9 2345 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm20773A0A0A6YXW2 232 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm20807A0A0A6YXX7 232 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm9772F6XPD8 135 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm20873J3QMQ9 232 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm20795J3QP49 232 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Smr2O09133 150 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Slc25a17O70579 307 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Evi2aP20934 223 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Twist1P26687 206 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gfra1P97785 468 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm21440Q3TTD8 232 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm10840Q3V2K9 103 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Plk3Q60806 631 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 MaoaQ64133 526 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 BsxQ810B3 232 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Scgb2b26Q8JZX1 112 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Olfr1447Q8VFX3 309 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Olfr796Q8VGJ1 310 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Vstm5Q9D806 199 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Zfhx4Q9JJN2 3550 aa9.58□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Igkv1-135A0A0B4J1H7 120 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Gm21882J3QN86 361 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 D430019H16RikJ3QPM6 83 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Olfr194L7N1Y8 306 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Kcns2O35174 477 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 GrnP28798 589 aaKnown RBP9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Defb7Q91V70 71 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Ssbp3Q9D032 388 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 MrapQ9D159 127 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Fstl3Q9EQC7 256 aa9.57□□□□□ -0.88
Sdc1-201ENSMUST00000020911 Tesk1O70146 627 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms