RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 CapgP24452 352 aaKnown RBP13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Ypel3P61237 119 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Tmem40Q4FJU9 225 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Znf260Q62513 407 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Trib1Q8K4K4 372 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1453Q8VFX0 307 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Lsm4Q9QXA5 137 aaKnown RBP13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Nubp1Q9R060 320 aa13.45□□□□□ -0.26
Shh-201ENSMUST00000002708 Tcrg-V4A0A0B4J1J8 138 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Tm4sf19E9Q9H8 206 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Defa-rs1P17533 116 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Rhox10Q4TU83 196 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Tnfsf15Q5UBV8 252 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1183Q8VFF8 303 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 FetubQ9QXC1 388 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Crybb1Q9WVJ5 250 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Trav12d-3A0A075B6A4 115 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 P01806 116 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Q3U1D9 316 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Commd9Q8K2Q0 198 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Tnfrsf13cQ9D8D0 175 aa13.44□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1118A0A0J9YUE7 307 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm44596A0A0N4SVA0 210 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm44501A8R0T9 150 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Fbxl7Q5BJ29 491 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Znf329Q6GQR8 522 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Vstm2aQ8R0A6 236 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 PpbpQ9EQI5 113 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm3285A0A1W2P7U0 201 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 9830107B12RikD3Z5D6 160 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Mtco2P00405 227 aaKnown RBP13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 BsgP18572 389 aaKnown RBP13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Gnb4P29387 340 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Fosl1P48755 273 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Vma21Q78T54 101 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1474Q7TQQ8 314 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1258Q8VGN6 311 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Gng10Q9CXP8 68 aa13.43□□□□□ -0.26
Shh-201ENSMUST00000002708 Fbn2Q61555 2907 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 C5ar1P30993 351 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Loxl1P97873 607 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Tctn2Q2MV57 700 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm10842Q3U587 122 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Zfp420Q7TMN8 578 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Immp1lQ9CQU8 166 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Btbd17Q9DB72 478 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Mettl9Q9EPL4 318 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1320A2AHM8 319 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Znf691Q3TDE8 283 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Immp2lQ8BPT6 175 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr577Q8VH11 312 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Fgfrl1Q91V87 529 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Urm1Q9D2P4 101 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Lamp5Q9D387 280 aa13.42□□□□□ -0.26
Shh-201ENSMUST00000002708 Cdkn1bP46414 197 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 3100002H09RikQ9CXW6 140 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 Mlst8Q9DCJ1 326 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 Mpdu1Q9R0Q9 247 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 Trav17A0A075B655 113 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 1700009N14RikQ14AA6 216 aaKnown RBP13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 NotoQ5TIS6 240 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 Nanos1Q80WY3 267 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 Lurap1Q9D6I9 239 aa13.41□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1293-psA0A1L1SVB5 326 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Spint5J3KMK8 105 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Hoxa3P02831 443 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Ccl1P10146 92 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 SelenotP62342 195 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Tmem52bQ0VBF2 186 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Mbnl2Q8C181 373 aaKnown RBP13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr495Q8VF12 330 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Etfrf1Q91V16 86 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Cma2Q91VB1 246 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Prr30Q9D9B7 401 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Kcnip2Q9JJ69 270 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 G6pc2Q9Z186 355 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Ighv1-19A0A0A6YWX0 117 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Gm36368A0A1D5RLK8 91 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Mettl23A2AA28 253 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Ascl2O35885 263 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 MymxQ2Q5T5 84 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 SriQ6P069 198 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Mgst1Q91VS7 155 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Ssbp3Q9D032 388 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 ArtnQ9Z0L2 224 aa13.4□□□□□ -0.26
Shh-201ENSMUST00000002708 Olfr1245A0A1L1SQJ6 307 aa13.4□□□□□ -0.27
Shh-201ENSMUST00000002708 RhobP62746 196 aa13.4□□□□□ -0.27
Shh-201ENSMUST00000002708 Prop1P97458 223 aa13.4□□□□□ -0.27
Shh-201ENSMUST00000002708 Q0VG62 139 aa13.4□□□□□ -0.27
Shh-201ENSMUST00000002708 Trav6-2Q5R1I4 113 aa13.4□□□□□ -0.27
Shh-201ENSMUST00000002708 Tmem190Q9D2E9 166 aa13.4□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm28171A0A087WQ19 227 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Olfr1458A0A1L1SSD5 307 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Gm14124A2AU83 715 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Zcchc24B2RVL6 241 aaKnown RBP13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Tmem139E9PX92 214 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Pmp2P24526 132 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Sumo1P63166 101 aaKnown RBP13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Wfdc8Q4KUS1 273 aa13.39□□□□□ -0.27
Shh-201ENSMUST00000002708 Dlx1Q64317 255 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms